| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is GP
Identifier: 218549376
GI number: 218549376
Start: 2094582
End: 2096747
Strand: Reverse
Name: GP
Synonym: EFER_2044
Alternate gene names: NA
Gene position: 2096747-2094582 (Counterclockwise)
Preceding gene: 218549377
Following gene: 218549375
Centisome position: 45.69
GC content: 50.51
Gene sequence:
>2166_bases ATGGCCGATGAAAACAGACTCAATTCCATTCTGTGTAAGTTTGACGCAGACTGGATGGCGAGCGATGAAGCCAGAACCGA GGCGACAAATGACCTGTATTTTAGCCGAGTGTCGCAATGGGATGACTGGCTATCAAACTACACGACCCTGCAATATCGCG GACAATTCGATGTTGTTCGCCCGGTGGTCAGGAAACTGGTCGCAGAGATGCGCCGGAACCCTATCGACGTTCTCTTCAGA CCAAAAGACGGCGCTAATCCTGATGCTGCCGATGTGCTGATGGGGATGTATCGTACTGATATGCGCCATAACACGGCAAA AATTGCCGTTAACGTTGGCGTTCGTGAGCAGATAGAGTCCGGCGTTGGTGCATGGCGTCTGGTCACGCAGTACGAAGACA ACGATCCAACAAGTAACAATCAGGTAATTCGACGCCTGCCAATCCATGAAGCCTGCTCACACGTCATATGGGACGCCAAC AGCAAGCAGATGGATAAGAGCGACGCTAAGCATTGCACGGTGATTAACGCTTTGTCACGCAATGGCTGGAAAGAGTTTGC AGAGGATTACGGTATTGATCCGGATACCTTGCCATCTTTCCAGAATCCGAACGATACATGGCTGTTCCCTTGGATATCGA ATGATGTCGTCTACGTCGCTGAGTATTACGAGGTAGAAGAGAAGAAAGAGAAAGTCTTTATCTACCGCGACCCGCTGACA GGTGAGCCGGTCAGCTATTACCAGCAGGATATCAAAGACGTCATCGACGACCTGGCTAATCGTGGATTCATTAAGGTAGC AGAGCGTAAGGTCAAGCGTCGGCGTGTGTATAAGTCGATCATCACCTGCACGCAGATACTGAAAGACCGCGAGAAGATAG CCGGAGAGCATATTCCAATCGTTCCAGTGTATGGCGAATGGTCATTCGCTGGTGACAAGGAGTGCTACGAAGGAGTGGTA AGGCTGACGAAAGACGGTCAGCGCCTTCGTAACATGATCATGTCGTTCAACGCCGATATTGTTGCTCGTTCACCGAAGAA GAAACCTACCTTCTTCCCTGAGCAAATCGAAGGCTACGAATACATGTACGGTGGAAATGATGACTATCCGTACTATCTGC AGAACAGGACCGATGAAAACGGTAACGACCTGCCGATTGGTCCAATCTCCTACATGGAAAACCCTGAAGTGCCGCAAGCC AACGCTTACATGCTTGAGGCTGCCACCAACGCAGTGAAAGAGGTGGCTAGTCTTGGCGTTGATGCGCAGGCAGCAAACTC TCAGGTCGCTTTCGATACCGTCAATCAACTGAACATGCGGGCAGACCTTGAGACATACGTGTTTCAGGATAACCTGGCTA CCGCAATGCGACGTGATGGCGAGATTTATGCCTCAATGGTAAACGATATTTATGACGTTCCTCGTCATGTAACGCTGACA CTTGAAGATGGAAGCGAGAAAGACGTTCAACTCTATGCGCAAGTTGTCGATTACCAGTCTGGCAATGTGGTCACACTCAA CGACATTCGCGGTCGATATGAGTGCTATACAGACGTTGGGCCATCCTTCCAGAGTATGAAGGAACAGAACCGCGCAGAGA TTCAGGAGTTGCTAACCAAGGTTCCGCAAGGTACTCCAGAGTTCCAGATGCTGATGCTGCAATACTTCACGCTGCTTGAC GGTAAAGGCGTCGAGATGATGCGAGAGTACGCGAACAAGCAACTGGTGATGATGGGGCTGAAGAAACCAGAAACACCTGA AGAGATGGAGATGGTACAGCAGGCTCAACAGCAGCCGCAGCAGCCATCAGCAGAGCAAATTCAGGCGCAGGGCATCCTTC TGCAAGGTCAGGCTGAATTGCTCAAGGCAGAGAACCAACAGGCGCAGATTCAGGTTGAAGCCGCCAAGGTTGAAGCCCAA AACCAACTCAACGCCGCGAAGATTGCAGAAATCTTCAACAATATGGACCTCGACAAGCAGGCAGAACTGCGTGAGTACCT CAAGCTCGTAGGTCAATTCCAGCAACAGCGCAGCAAGGACGCTCGTGCTAACGCTGAGCTGCTTCTTAAAGATGCAGACC AGACTCATTCACAACGCATGGATTTCGCGAATCTTATGCGTCAAGTTCAAATCCCCTCCGGCGGAGTAGCCGAGACACCT CAATAA
Upstream 100 bases:
>100_bases ATACATGATGCGCCGCTTCGCCAAAATGATGCGCGACATCAAAAAACCAAAAGAGAAAAAGATACCAGCCCCAATCAGGC CCATCGCACGGAGAACTTAA
Downstream 100 bases:
>100_bases GAGAGAGTTAATCATGGACCAAACCACCGACATTCAGGCTTCTGAAGAATTAACCCTGCCCGGCAATCATGCAGCGGCAT CTGCTGATGGCTTAGTTGTC
Product: Portal protein (protein gp1)
Products: NA
Alternate protein names: Portal Protein P; Bacteriophage Portal Protein; APSE-2 Prophage
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVRPVVRKLVAEMRRNPIDVLFR PKDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIESGVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDAN SKQMDKSDAKHCTVINALSRNGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWISNDVVYVAEYYEVEEKKEKVFIYRDPLT GEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPIVPVYGEWSFAGDKECYEGVV RLTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYEYMYGGNDDYPYYLQNRTDENGNDLPIGPISYMENPEVPQA NAYMLEAATNAVKEVASLGVDAQAANSQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLT LEDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYTDVGPSFQSMKEQNRAEIQELLTKVPQGTPEFQMLMLQYFTLLD GKGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQQPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQ NQLNAAKIAEIFNNMDLDKQAELREYLKLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETP Q
Sequences:
>Translated_721_residues MADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVRPVVRKLVAEMRRNPIDVLFR PKDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIESGVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDAN SKQMDKSDAKHCTVINALSRNGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWISNDVVYVAEYYEVEEKKEKVFIYRDPLT GEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPIVPVYGEWSFAGDKECYEGVV RLTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYEYMYGGNDDYPYYLQNRTDENGNDLPIGPISYMENPEVPQA NAYMLEAATNAVKEVASLGVDAQAANSQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLT LEDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYTDVGPSFQSMKEQNRAEIQELLTKVPQGTPEFQMLMLQYFTLLD GKGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQQPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQ NQLNAAKIAEIFNNMDLDKQAELREYLKLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETP Q >Mature_720_residues ADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVRPVVRKLVAEMRRNPIDVLFRP KDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIESGVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDANS KQMDKSDAKHCTVINALSRNGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWISNDVVYVAEYYEVEEKKEKVFIYRDPLTG EPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPIVPVYGEWSFAGDKECYEGVVR LTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYEYMYGGNDDYPYYLQNRTDENGNDLPIGPISYMENPEVPQAN AYMLEAATNAVKEVASLGVDAQAANSQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLTL EDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYTDVGPSFQSMKEQNRAEIQELLTKVPQGTPEFQMLMLQYFTLLDG KGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQQPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQN QLNAAKIAEIFNNMDLDKQAELREYLKLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82493; Mature: 82362
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVR CCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHH PVVRKLVAEMRRNPIDVLFRPKDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIES HHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHC GVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDANSKQMDKSDAKHCTVINALSR CCCCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHC NGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWISNDVVYVAEYYEVEEKKEKVFIYRDPLT CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHCCCCEEEEEECCCC GEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPI CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VPVYGEWSFAGDKECYEGVVRLTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYE EEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCEE YMYGGNDDYPYYLQNRTDENGNDLPIGPISYMENPEVPQANAYMLEAATNAVKEVASLGV EEECCCCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC DAQAANSQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLT CCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE LEDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYTDVGPSFQSMKEQNRAEIQELLTK ECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH VPQGTPEFQMLMLQYFTLLDGKGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQ CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC QPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQNQLNAAKIAEIFNNMDLDKQ CCCHHHHHHCCEEEECHHHHHHCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHCCCCCCHH AELREYLKLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETP HHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCC Q C >Mature Secondary Structure ADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWLSNYTTLQYRGQFDVVR CCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHH PVVRKLVAEMRRNPIDVLFRPKDGANPDAADVLMGMYRTDMRHNTAKIAVNVGVREQIES HHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHC GVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDANSKQMDKSDAKHCTVINALSR CCCCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHC NGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWISNDVVYVAEYYEVEEKKEKVFIYRDPLT CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHCCCCEEEEEECCCC GEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRVYKSIITCTQILKDREKIAGEHIPI CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VPVYGEWSFAGDKECYEGVVRLTKDGQRLRNMIMSFNADIVARSPKKKPTFFPEQIEGYE EEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCEE YMYGGNDDYPYYLQNRTDENGNDLPIGPISYMENPEVPQANAYMLEAATNAVKEVASLGV EEECCCCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC DAQAANSQVAFDTVNQLNMRADLETYVFQDNLATAMRRDGEIYASMVNDIYDVPRHVTLT CCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE LEDGSEKDVQLYAQVVDYQSGNVVTLNDIRGRYECYTDVGPSFQSMKEQNRAEIQELLTK ECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH VPQGTPEFQMLMLQYFTLLDGKGVEMMREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQ CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC QPSAEQIQAQGILLQGQAELLKAENQQAQIQVEAAKVEAQNQLNAAKIAEIFNNMDLDKQ CCCHHHHHHCCEEEECHHHHHHCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHCCCCCCHH AELREYLKLVGQFQQQRSKDARANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETP HHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA