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The map label for this gene is ynaI [H]

Identifier: 218548998

GI number: 218548998

Start: 1693096

End: 1694130

Strand: Direct

Name: ynaI [H]

Synonym: EFER_1646

Alternate gene names: 218548998

Gene position: 1693096-1694130 (Clockwise)

Preceding gene: 218548996

Following gene: 218549000

Centisome position: 36.9

GC content: 41.55

Gene sequence:

>1035_bases
ATGATTACTCAAATATTTATCGTTAACGCCCTGAATCTGGCGATTGTTTTCGGAAGCTGTGCAGCATTGGTGTTGATGAG
CTTTTGGTTTCGCCATGGGCAGAAAAGAAGAAAAGGCTTTGTATTTCATGCCGCTCAATTCTTTATCTATGCGGTCATTA
TCGGCGCAATTGGTAACATTGTTAATTATGTGATTGCAACGTATAAAATTAATTTTATCTCTTCCGATGCAATCGATTTT
ATTTGTACATCATTAATTGCGCTTATTTTAACCGTTAAACTGTTTTTGTTGATCAATCAATTTGAACGCAAACAGATCAA
AAAAGGTCGAGATGTGACCAGTGCGCGGATTCTTTCGCGCATAATTAAGATCACGATAATTATGGTGATTGTATTGCTCT
ATGGTGAGCATTTTGGCATGAGCCTTTCTGGTCTGTTGACCTTTGGTGGTATCGGTGGTCTTGCTGTTGGTATGGCAGGG
AAAGATATTCTAAGTAATTTCTTTTCCGGGATTATGCTTTATTTTGACCGCCCTTTCAGTATCGGCGACTGGATCCGTTC
TCCTGACAGAAATATTGAAGGTACGGTCACCGAAATTGGCTGGCGGATTACCAAAATTACGACATTTAATAACCGCCCAC
TCTACGTGCCCAACTCCTTGTTTTCTTCTATTAGTGTGGAAAACCCCGGCAGAATGACCAACCGACGGATAACCACAACC
ATTGGTTTACGTTATGAAGATGCCGCAAAGGTGGGAACAATTGTAGAAGCGGTGCGCCAGATGTTGCAGACACATGAAAG
CATTGATCAACATCAGACGTTACTGGTGTATTTCAATGATTTTGGTGATTCGTCATTAAACATTATGGTTTATTGTTTTA
CTAAAACCACCGTCTGGGCCGAATGGCTGGCAGCGCAACAGGATGTTTTCCTGAAGATTATCGATATTGTCCAGGCGCAT
GGCGCAGATTTTGCGTTCCCAAGTCAGACGCTGTATCTGGATAACTCGACACCCCAGCAAATTAACGAGAAATAA

Upstream 100 bases:

>100_bases
CCGACCTTTCGATAGATGACCTGAATGTTTGCACACGGTAAAATATTCTCGCCCAGAGTATTTCGGCTAATTAGCCGAGC
ATGGAGGAACAGAGATAATA

Downstream 100 bases:

>100_bases
CGTTAATTTTGTCTAGAAAAACTGGCGCCCAAATGCGCCAGTTTTACTTTGAAAGATGTCTACACTAAATAATTCGAGTC
GCAGCACCTGCAACGAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MITQIFIVNALNLAIVFGSCAALVLMSFWFRHGQKRRKGFVFHAAQFFIYAVIIGAIGNIVNYVIATYKINFISSDAIDF
ICTSLIALILTVKLFLLINQFERKQIKKGRDVTSARILSRIIKITIIMVIVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVTEIGWRITKITTFNNRPLYVPNSLFSSISVENPGRMTNRRITTT
IGLRYEDAAKVGTIVEAVRQMLQTHESIDQHQTLLVYFNDFGDSSLNIMVYCFTKTTVWAEWLAAQQDVFLKIIDIVQAH
GADFAFPSQTLYLDNSTPQQINEK

Sequences:

>Translated_344_residues
MITQIFIVNALNLAIVFGSCAALVLMSFWFRHGQKRRKGFVFHAAQFFIYAVIIGAIGNIVNYVIATYKINFISSDAIDF
ICTSLIALILTVKLFLLINQFERKQIKKGRDVTSARILSRIIKITIIMVIVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVTEIGWRITKITTFNNRPLYVPNSLFSSISVENPGRMTNRRITTT
IGLRYEDAAKVGTIVEAVRQMLQTHESIDQHQTLLVYFNDFGDSSLNIMVYCFTKTTVWAEWLAAQQDVFLKIIDIVQAH
GADFAFPSQTLYLDNSTPQQINEK
>Mature_344_residues
MITQIFIVNALNLAIVFGSCAALVLMSFWFRHGQKRRKGFVFHAAQFFIYAVIIGAIGNIVNYVIATYKINFISSDAIDF
ICTSLIALILTVKLFLLINQFERKQIKKGRDVTSARILSRIIKITIIMVIVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVTEIGWRITKITTFNNRPLYVPNSLFSSISVENPGRMTNRRITTT
IGLRYEDAAKVGTIVEAVRQMLQTHESIDQHQTLLVYFNDFGDSSLNIMVYCFTKTTVWAEWLAAQQDVFLKIIDIVQAH
GADFAFPSQTLYLDNSTPQQINEK

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=340, Percent_Identity=84.1176470588235, Blast_Score=607, Evalue=1e-175,
Organism=Escherichia coli, GI1789291, Length=261, Percent_Identity=24.5210727969349, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 38730; Mature: 38730

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQIFIVNALNLAIVFGSCAALVLMSFWFRHGQKRRKGFVFHAAQFFIYAVIIGAIGNI
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
VNYVIATYKINFISSDAIDFICTSLIALILTVKLFLLINQFERKQIKKGRDVTSARILSR
HHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IIKITIIMVIVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCC
IGDWIRSPDRNIEGTVTEIGWRITKITTFNNRPLYVPNSLFSSISVENPGRMTNRRITTT
HHHHHCCCCCCCCCCHHHHCEEEEEEEEECCCCEECCHHHHHHCCCCCCCCCCCCEEEEE
IGLRYEDAAKVGTIVEAVRQMLQTHESIDQHQTLLVYFNDFGDSSLNIMVYCFTKTTVWA
EEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECHHHHH
EWLAAQQDVFLKIIDIVQAHGADFAFPSQTLYLDNSTPQQINEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MITQIFIVNALNLAIVFGSCAALVLMSFWFRHGQKRRKGFVFHAAQFFIYAVIIGAIGNI
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
VNYVIATYKINFISSDAIDFICTSLIALILTVKLFLLINQFERKQIKKGRDVTSARILSR
HHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IIKITIIMVIVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCC
IGDWIRSPDRNIEGTVTEIGWRITKITTFNNRPLYVPNSLFSSISVENPGRMTNRRITTT
HHHHHCCCCCCCCCCHHHHCEEEEEEEEECCCCEECCHHHHHHCCCCCCCCCCCCEEEEE
IGLRYEDAAKVGTIVEAVRQMLQTHESIDQHQTLLVYFNDFGDSSLNIMVYCFTKTTVWA
EEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECHHHHH
EWLAAQQDVFLKIIDIVQAHGADFAFPSQTLYLDNSTPQQINEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]