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The map label for this gene is ydhJ [H]

Identifier: 218548760

GI number: 218548760

Start: 1439788

End: 1440654

Strand: Reverse

Name: ydhJ [H]

Synonym: EFER_1399

Alternate gene names: 218548760

Gene position: 1440654-1439788 (Counterclockwise)

Preceding gene: 218548761

Following gene: 218548759

Centisome position: 31.4

GC content: 46.14

Gene sequence:

>867_bases
GTGGTGAATATGTCGCTTAAAACAGTTAAGTATTTTTCAACTATTGCCATCGCAACTATCGCTATCCTGGCGGGTTGGTG
GTTATGGAATTATTACATGCAGTCGCCCTGGACGCGTGATGGCAAAATCCGTGCTGAACAAGTGAGTGTCGCCCCACAAG
TTTCTGGTCGGATTAGTAAATTAAATGTTAAGGATAATCAATTTGTTAATGCCAATGACGTCTTATTTATCATTGATAAT
ACGCCCTTTAAAATTGCAGAACTGAACGCCGAGGCCCAGCTGGCGAAAGCGCAGTCGGATTTAGCAAAGGCAAACAACGA
AGCGACACGCCGTCGCCATTTATCACAAAAATTTATTTCTGTTGAAGAGCTGGATACTGCAAATTTGAACGTTAAAGCAA
TGCAGGCCAGTGTAGATGAAGCCAAAGCTTCGTTAAAACAGGCGCAATGGCAACTGGCACAAACGGAAGTTCGTGCTCCT
GTAGCAGGTTGGGTCACAAATCTGTCCACCCGCGTTGGCGATTACGCGACCACCGGAACTCCTCTTTTCGCCCTCATTGA
CAGCAAATCGTTTTATGTCATGGGGTATTTTGAAGAAACTAAACTGCAACATATTCGTGAAGGTGCTCCTGCCCAAATCA
CTTTATACAGTGGCAATGTGAAGTTACAGGGTCACGTTTCCAGCATTGGGCGAGCTATATATGATCAGAGTGTCGAGAGT
GATTCTGGTCTGGTACCCGATATCAAACCTAATGTGCCCTGGGTTCGTCTGGCACAACGGGTGCCCGTACGCATCGAATT
CAATCACCTGCCCAAAGATGTAACTCTGGTTGCTGGCACAACATGCAGCGTGGCGATTGGCCAATAA

Upstream 100 bases:

>100_bases
TTCGTGAGTGGATCTATTCGGGTGAAATATGGCATCCCCTGCTTATGGATTTATCCCTTTTTATCCTTAGCGTCTGCCTT
GGACTGGTCTTGTTAATTGT

Downstream 100 bases:

>100_bases
ATGAAAGTTCCCAGCCTCCGAAATGCCCCCTGGATACGGGCTACAACTGCACAATGGCGCTATGCACTAAGAAATTGCAT
TGCTATGTGTCTGGCATTGA

Product: undecaprenyl pyrophosphate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MVNMSLKTVKYFSTIAIATIAILAGWWLWNYYMQSPWTRDGKIRAEQVSVAPQVSGRISKLNVKDNQFVNANDVLFIIDN
TPFKIAELNAEAQLAKAQSDLAKANNEATRRRHLSQKFISVEELDTANLNVKAMQASVDEAKASLKQAQWQLAQTEVRAP
VAGWVTNLSTRVGDYATTGTPLFALIDSKSFYVMGYFEETKLQHIREGAPAQITLYSGNVKLQGHVSSIGRAIYDQSVES
DSGLVPDIKPNVPWVRLAQRVPVRIEFNHLPKDVTLVAGTTCSVAIGQ

Sequences:

>Translated_288_residues
MVNMSLKTVKYFSTIAIATIAILAGWWLWNYYMQSPWTRDGKIRAEQVSVAPQVSGRISKLNVKDNQFVNANDVLFIIDN
TPFKIAELNAEAQLAKAQSDLAKANNEATRRRHLSQKFISVEELDTANLNVKAMQASVDEAKASLKQAQWQLAQTEVRAP
VAGWVTNLSTRVGDYATTGTPLFALIDSKSFYVMGYFEETKLQHIREGAPAQITLYSGNVKLQGHVSSIGRAIYDQSVES
DSGLVPDIKPNVPWVRLAQRVPVRIEFNHLPKDVTLVAGTTCSVAIGQ
>Mature_288_residues
MVNMSLKTVKYFSTIAIATIAILAGWWLWNYYMQSPWTRDGKIRAEQVSVAPQVSGRISKLNVKDNQFVNANDVLFIIDN
TPFKIAELNAEAQLAKAQSDLAKANNEATRRRHLSQKFISVEELDTANLNVKAMQASVDEAKASLKQAQWQLAQTEVRAP
VAGWVTNLSTRVGDYATTGTPLFALIDSKSFYVMGYFEETKLQHIREGAPAQITLYSGNVKLQGHVSSIGRAIYDQSVES
DSGLVPDIKPNVPWVRLAQRVPVRIEFNHLPKDVTLVAGTTCSVAIGQ

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=285, Percent_Identity=81.7543859649123, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1789637, Length=273, Percent_Identity=38.8278388278388, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790519, Length=291, Percent_Identity=33.6769759450172, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1789041, Length=302, Percent_Identity=26.158940397351, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788711, Length=316, Percent_Identity=26.2658227848101, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87082036, Length=136, Percent_Identity=33.0882352941176, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790024, Length=271, Percent_Identity=22.5092250922509, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790012, Length=284, Percent_Identity=24.6478873239437, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 31882; Mature: 31882

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNMSLKTVKYFSTIAIATIAILAGWWLWNYYMQSPWTRDGKIRAEQVSVAPQVSGRISK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEE
LNVKDNQFVNANDVLFIIDNTPFKIAELNAEAQLAKAQSDLAKANNEATRRRHLSQKFIS
EECCCCCEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
VEELDTANLNVKAMQASVDEAKASLKQAQWQLAQTEVRAPVAGWVTNLSTRVGDYATTGT
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PLFALIDSKSFYVMGYFEETKLQHIREGAPAQITLYSGNVKLQGHVSSIGRAIYDQSVES
CEEEEEECCCEEEEEEEHHHHHHHHHCCCCEEEEEEECCEEEEEEHHHHHHHHHHCCCCC
DSGLVPDIKPNVPWVRLAQRVPVRIEFNHLPKDVTLVAGTTCSVAIGQ
CCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEEEECCEEEEEECC
>Mature Secondary Structure
MVNMSLKTVKYFSTIAIATIAILAGWWLWNYYMQSPWTRDGKIRAEQVSVAPQVSGRISK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEE
LNVKDNQFVNANDVLFIIDNTPFKIAELNAEAQLAKAQSDLAKANNEATRRRHLSQKFIS
EECCCCCEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
VEELDTANLNVKAMQASVDEAKASLKQAQWQLAQTEVRAPVAGWVTNLSTRVGDYATTGT
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PLFALIDSKSFYVMGYFEETKLQHIREGAPAQITLYSGNVKLQGHVSSIGRAIYDQSVES
CEEEEEECCCEEEEEEEHHHHHHHHHCCCCEEEEEEECCEEEEEEHHHHHHHHHHCCCCC
DSGLVPDIKPNVPWVRLAQRVPVRIEFNHLPKDVTLVAGTTCSVAIGQ
CCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]