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The map label for this gene is ydjN [H]

Identifier: 218548702

GI number: 218548702

Start: 1373979

End: 1375370

Strand: Reverse

Name: ydjN [H]

Synonym: EFER_1338

Alternate gene names: 218548702

Gene position: 1375370-1373979 (Counterclockwise)

Preceding gene: 218548703

Following gene: 218548699

Centisome position: 29.97

GC content: 50.65

Gene sequence:

>1392_bases
ATGAATTTTCCATTAATTGCGAACATTGTTGTGTTCGTCGCTCTGCTGTTTGTGCTGGCGCAAGCCCGTCACAAACAGTG
GAGTCTGGCAAAAAAAGTGCTGGTGGGTCTGGTCATGGGCGTGGTGTTTGGTCTTGCCCTGCATACCATTTATGGTTCAG
ACAGCCAGGTGTTAAAAGACTCAGTACAGTGGTTCAACATTGTGGGCAACGGTTACGTTCAGTTACTGCAAATGATCGTT
ATGCCACTGGTATTTGCTTCAATTCTCAGTGCTGTTGCTCGTCTGCATAATGCCTCACAACTGGGCAAAATCAGCTTCCT
GACCATTGGTACGCTGCTGTTTACCACGCTGATTGCTGCACTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTCTGACCG
CAGAAGGTCTGGTGCAGGGTGGCGCAGAAACCGCGCGCCTTAACGCGATTGAAAGTAATTATGTAGGTAAAGTTGCCGAC
CTCAGCGTGCCACAGCTGGTGCTTTCTTTTATTCCTAAAAACCCGTTTGCTGATCTGACAGGCGCGAATCCAACCTCGAT
CATCAGCGTGGTTATCTTCGCCGCATTCCTTGGTGTTGCAGCACTTAAATTGCTAAAAGATGACGCACCAAAAGGTGAGC
GTGTGTTAACGGCGATCGATACCCTACAAAGCTGGGTGATGAAACTGGTGCGTTTGGTTATGCAACTCACCCCTTACGGT
GTTCTTGCCTTGATGACCAAAGTCGTCGCAGGTTCAAACTTGCAGGACATCATTAAGCTTGGCAGCTTTGTTGTTGCCTC
TTACCTTGGCCTGGTGATTATGTTTGCTGTACATGGTCTTCTGCTGGGTATCAATGGGGTAAGCCCACTGAAGTACTTTC
GTAAAGTGTGGCCGGTGCTGACTTTTGCCTTCACCAGCCGCTCCAGTGCAGCATCCATTCCCCTGAATGTGGAAGCTCAA
ACGCGTCGTCTCGGCGTACCTGAATCAATTGCCAGCTTTGCGGCCTCATTCGGTGCCACCATCGGTCAAAACGGTTGTGC
CGGGCTTTATCCGGCAATGCTGGCAGTGATGGTTGCTCCGACTGTTGGTATTAATCCGCTGGATCCGATGTGGATTGCGA
CTCTGGTAGGTATCGTGACCGTGAGTTCTGCGGGTGTTGCTGGTGTTGGTGGTGGTGCAACCTTTGCTGCACTGATTGTG
TTACCTGCAATGGGCTTACCTGTAACACTGGTGGCGCTACTCATCTCTGTTGAACCATTGATTGATATGGGGCGTACCGC
GTTGAACGTGAGCGGCTCCATGACGGCGGGTACGCTGACCAGTCAGTGGCTGAAACAAACAGATAAATCCATTCTGGATA
GTGAAGAAGACGCTGAACTGGCGCACCGTTAA

Upstream 100 bases:

>100_bases
ATTCCATTTGAATATAAGAGCCGGGTCACAGTTCTGATAATCTGACGCCAACAGAATCGTCTTGTCGGGCGATTCACATA
AAAATATCAGGAGAACGGGG

Downstream 100 bases:

>100_bases
TCCTGATTTGTTACGTTAAACGCCTGTCATCCCGACAGGCGTTTTTTTATTCTTCGACCTCATTTTCCTGACGAATCTGA
TTTGCCCAGCGTTGGGCCGA

Product: cation-acid symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNFPLIANIVVFVALLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVAD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLVIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKSILDSEEDAELAHR

Sequences:

>Translated_463_residues
MNFPLIANIVVFVALLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVAD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLVIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKSILDSEEDAELAHR
>Mature_463_residues
MNFPLIANIVVFVALLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVAD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLVIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKSILDSEEDAELAHR

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=287, Percent_Identity=31.0104529616725, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI223468566, Length=287, Percent_Identity=31.0104529616725, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI5032093, Length=286, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI194239697, Length=468, Percent_Identity=23.9316239316239, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI21314632, Length=480, Percent_Identity=28.9583333333333, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI40254478, Length=513, Percent_Identity=26.5107212475634, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4827012, Length=304, Percent_Identity=28.6184210526316, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI169790839, Length=477, Percent_Identity=25.1572327044025, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI66773030, Length=354, Percent_Identity=27.683615819209, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=97.8401727861771, Blast_Score=897, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=442, Percent_Identity=26.6968325791855, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789947, Length=439, Percent_Identity=23.2346241457859, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71983106, Length=442, Percent_Identity=25.5656108597285, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71983099, Length=442, Percent_Identity=25.5656108597285, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193206654, Length=487, Percent_Identity=25.4620123203285, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17541374, Length=445, Percent_Identity=25.1685393258427, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193206505, Length=487, Percent_Identity=24.435318275154, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71996953, Length=439, Percent_Identity=25.2847380410023, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537407, Length=449, Percent_Identity=24.7216035634744, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24583025, Length=462, Percent_Identity=24.4588744588745, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17137668, Length=462, Percent_Identity=24.4588744588745, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24583023, Length=462, Percent_Identity=24.4588744588745, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48681; Mature: 48681

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFPLIANIVVFVALLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHH
LVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVADLSVPQLVLSFIPKNPFADLT
HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCHHHCHHHHHHHHHCCCCCCCCCC
GANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLVIMFAVHGLLLGINGVSPLKYFRKVWPVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAP
HHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHC
TVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IDMGRTALNVSGSMTAGTLTSQWLKQTDKSILDSEEDAELAHR
HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MNFPLIANIVVFVALLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHH
LVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVADLSVPQLVLSFIPKNPFADLT
HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCHHHCHHHHHHHHHCCCCCCCCCC
GANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLVIMFAVHGLLLGINGVSPLKYFRKVWPVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAP
HHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHC
TVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IDMGRTALNVSGSMTAGTLTSQWLKQTDKSILDSEEDAELAHR
HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]