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The map label for this gene is ydjX [H]

Identifier: 218548681

GI number: 218548681

Start: 1353401

End: 1354105

Strand: Reverse

Name: ydjX [H]

Synonym: EFER_1315

Alternate gene names: 218548681

Gene position: 1354105-1353401 (Counterclockwise)

Preceding gene: 218548682

Following gene: 218548680

Centisome position: 29.51

GC content: 42.13

Gene sequence:

>705_bases
ATGAAAGCTGAGTGTAAGTTCGTTGTTGGTAGCCTGACTTTTGCTCTGGCAATTTATCTTGTTTATGCTTCAGGCATATT
CAATTTCATTAGCGATCTTCCTCACTTGCAGGCACTTATTCGCCAGAGTGGTATTTTCGGTTACAGCCTTTATATTCTGT
TATTTGTTATTGCCACTCTTGTGCTGCTGCCCGGTAGTGTCCTGGTCATTGGCAGTGGCATTATTTTTGGTCCATTCTTG
GGGACTCTGCTTTCGTTAGTTGCAGCAACGCTCGCTTCGTCGGTTTCCTTTTTGATTGCTCGCTGGATGGGGCGAGAACT
GGTGCTGAAATATGTTGGGGATACCACCGTCTTTCAGTCTATTGAGAAAGGGATTGCACGTAACGGTATCGATTTTCTTA
TTCTTACCCGCTTAATTCCGCTATTTCCTTACAATATTCAAAATTACGCCTACGGATTAACCGCCATTGCCTTTTGGCCA
TATACCTTTATTTCGGCATTCACGACTCTGCCGGGGATCTTTATTTATACTTTTATGGCCAGCGACCTTGTTACTGAAGG
CATAACATTATCATTTATTTTCAAACTTTGTCTGGCAGGGCTAATACTGTTTATTCTTATTCAGCTTGCTAAATGCTACG
CCCGTTATAAACAAGTGGCACTGACCACTTCTGATAAAACCTCTTTAACCGAACAACAAAGATGA

Upstream 100 bases:

>100_bases
GAAACTGGCAGTAAGGATTTGTGACCAGCTTAGGTTTGTTATACCGTCATCGCGTTTTTCACTTCTCTATTATCAAGGCT
TGATATAGGAAATCTCCACG

Downstream 100 bases:

>100_bases
AAGATGAGAGATAAAAACCGTAAAATGTGGCTCTGGCGTGGCGTCATTATCATCTTGTTAATTGTTGCGCTGCTCGCATG
GGCGCTGATTCCCGGCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKAECKFVVGSLTFALAIYLVYASGIFNFISDLPHLQALIRQSGIFGYSLYILLFVIATLVLLPGSVLVIGSGIIFGPFL
GTLLSLVAATLASSVSFLIARWMGRELVLKYVGDTTVFQSIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTAIAFWP
YTFISAFTTLPGIFIYTFMASDLVTEGITLSFIFKLCLAGLILFILIQLAKCYARYKQVALTTSDKTSLTEQQR

Sequences:

>Translated_234_residues
MKAECKFVVGSLTFALAIYLVYASGIFNFISDLPHLQALIRQSGIFGYSLYILLFVIATLVLLPGSVLVIGSGIIFGPFL
GTLLSLVAATLASSVSFLIARWMGRELVLKYVGDTTVFQSIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTAIAFWP
YTFISAFTTLPGIFIYTFMASDLVTEGITLSFIFKLCLAGLILFILIQLAKCYARYKQVALTTSDKTSLTEQQR
>Mature_234_residues
MKAECKFVVGSLTFALAIYLVYASGIFNFISDLPHLQALIRQSGIFGYSLYILLFVIATLVLLPGSVLVIGSGIIFGPFL
GTLLSLVAATLASSVSFLIARWMGRELVLKYVGDTTVFQSIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTAIAFWP
YTFISAFTTLPGIFIYTFMASDLVTEGITLSFIFKLCLAGLILFILIQLAKCYARYKQVALTTSDKTSLTEQQR

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=234, Percent_Identity=73.0769230769231, Blast_Score=349, Evalue=8e-98,
Organism=Escherichia coli, GI1788049, Length=167, Percent_Identity=30.5389221556886, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25842; Mature: 25842

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAECKFVVGSLTFALAIYLVYASGIFNFISDLPHLQALIRQSGIFGYSLYILLFVIATL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLLPGSVLVIGSGIIFGPFLGTLLSLVAATLASSVSFLIARWMGRELVLKYVGDTTVFQS
HHCCCCCEEHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTAIAFWPYTFISAFTTLPGIFIYTFMA
HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLVTEGITLSFIFKLCLAGLILFILIQLAKCYARYKQVALTTSDKTSLTEQQR
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MKAECKFVVGSLTFALAIYLVYASGIFNFISDLPHLQALIRQSGIFGYSLYILLFVIATL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLLPGSVLVIGSGIIFGPFLGTLLSLVAATLASSVSFLIARWMGRELVLKYVGDTTVFQS
HHCCCCCEEHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTAIAFWPYTFISAFTTLPGIFIYTFMA
HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLVTEGITLSFIFKLCLAGLILFILIQLAKCYARYKQVALTTSDKTSLTEQQR
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]