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The map label for this gene is bssR [H]

Identifier: 218548355

GI number: 218548355

Start: 1010351

End: 1010734

Strand: Direct

Name: bssR [H]

Synonym: EFER_0977

Alternate gene names: 218548355

Gene position: 1010351-1010734 (Clockwise)

Preceding gene: 218548353

Following gene: 218548356

Centisome position: 22.02

GC content: 47.92

Gene sequence:

>384_bases
ATGTTCGTTGACCGACTGAGAAGCGATCTGCTGAATAAGCTGATCAATGCCAGACTCGACCTTGCAGCCTATTTACAGCT
ACGCAAGGCCAAGGGGTATATGTCTGTCAGCGAGAGTGAGCATCTACGTGATAATTTTTTTGAACTGAATCATGAAATAC
ATGACAAGTCACTGCGGTTAAATTTACATCTGGATAAAGAAGAGTGGGATGCCCTTCACCATGCTGAAGATGCATTAGCC
ACAGCTGCAGTTTGCCTGATGACCGGGCATCATGACTGCCCAACATTTATTGCCGTCAATGCAGAGAAACTTGATCGCGC
TCTGATGACCTTATCGCTGAGCATTCAGTGCCTGCAGATGCACTCGCCGCTGGCGCACGCGTAA

Upstream 100 bases:

>100_bases
TATTGTTATTAGAGGGGGGATAATTGATCCAGGGCATAAATCTGTACAAAAAACGACCATACTATAAAGTTACACAAGGG
CAAAAGAGGAGGAACGAAGA

Downstream 100 bases:

>100_bases
GCCGGGGGAGGCAACTCCCCCTTTTGGTTAAGTTTATGTAAAAATCAGCTCATGCTTCTGACTGATGACTACGCTTGAAC
GAGAGTCATTAAGGAGGCGT

Product: biofilm formation regulatory protein BssR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFVDRLRSDLLNKLINARLDLAAYLQLRKAKGYMSVSESEHLRDNFFELNHEIHDKSLRLNLHLDKEEWDALHHAEDALA
TAAVCLMTGHHDCPTFIAVNAEKLDRALMTLSLSIQCLQMHSPLAHA

Sequences:

>Translated_127_residues
MFVDRLRSDLLNKLINARLDLAAYLQLRKAKGYMSVSESEHLRDNFFELNHEIHDKSLRLNLHLDKEEWDALHHAEDALA
TAAVCLMTGHHDCPTFIAVNAEKLDRALMTLSLSIQCLQMHSPLAHA
>Mature_127_residues
MFVDRLRSDLLNKLINARLDLAAYLQLRKAKGYMSVSESEHLRDNFFELNHEIHDKSLRLNLHLDKEEWDALHHAEDALA
TAAVCLMTGHHDCPTFIAVNAEKLDRALMTLSLSIQCLQMHSPLAHA

Specific function: Represses biofilm formation in M9C glu and LB glu media but not in M9C and LB media. Seems to act as a global regulator of several genes involved in catabolite repression and stress response and regulation of the uptake and export of signaling pathways. C

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787059, Length=127, Percent_Identity=77.9527559055118, Blast_Score=204, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020359
- ProDom:   PD079626 [H]

Pfam domain/function: PF10799 YliH [H]

EC number: NA

Molecular weight: Translated: 14499; Mature: 14499

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVDRLRSDLLNKLINARLDLAAYLQLRKAKGYMSVSESEHLRDNFFELNHEIHDKSLRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
NLHLDKEEWDALHHAEDALATAAVCLMTGHHDCPTFIAVNAEKLDRALMTLSLSIQCLQM
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
HSPLAHA
CCCCCCC
>Mature Secondary Structure
MFVDRLRSDLLNKLINARLDLAAYLQLRKAKGYMSVSESEHLRDNFFELNHEIHDKSLRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
NLHLDKEEWDALHHAEDALATAAVCLMTGHHDCPTFIAVNAEKLDRALMTLSLSIQCLQM
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
HSPLAHA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]