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The map label for this gene is dedD [H]

Identifier: 218548231

GI number: 218548231

Start: 866302

End: 866970

Strand: Direct

Name: dedD [H]

Synonym: EFER_0849

Alternate gene names: 218548231

Gene position: 866302-866970 (Clockwise)

Preceding gene: 218548230

Following gene: 218548232

Centisome position: 18.88

GC content: 57.25

Gene sequence:

>669_bases
TTGACGCGAGGAGAAGCGGTGGCAAGTAAGTTTCAGAATCGGTTAGTGGGTACGATCGTGCTGGTGGCGCTGGGGGTGAT
TGTACTTCCAGGGTTGCTGGACGGGCAGAAAAAACATTATCAGGATGAGTTCGCGGCTATCCCGCTGGTGCCAAAAGCGG
GCGATCGCGATGAGCCTGATATGATGCCAGCCGCCACCCAGGCGCTGCCGACGCAGCCGCCGGAAGGCGCAGCGGAAGAG
GTGCGGGCAGGTGATGCTGCCGCGCCGTCGCTCGATCCGGCCACTATTGCAGCCAATAACACCGAGTTTGAACCGGAACC
TGCACCGGTCATCCCACCGAAGCCGAAACCGGTGGAGCCGCCTAAGCCGAAGGTTGAAGCACCACCTGCGCCGAAGCCGG
TCGTGGAAGAAAAAGCCGCCCCGACGGGTAAAGCCTATGTTGTACAACTGGGGGCACTGAAAAATGCCGATAAAGTGAAT
GAGATTGTCGGTAAGCTGCGCGGTGCCGGTTATCGGGTTTATACGTCGCCATCCACGCCAGTGCAGGGTAAAATTACCCG
TATTCTGGTTGGGCCGGATGCCTCGAAAGATAAGCTGAAAGGTTCGCTGGGTGAGTTGAAGCAACTTTCTGGCTTAAGCG
GCGTGGTAATGGGTTATACACCGAATTAA

Upstream 100 bases:

>100_bases
GTGGCGCAGGCATGGGATGCCGCAATGGCGGACGCTAAAGCGGAAGATACCGTGCTGGTGTGTGGTTCGTTCCACACGGT
CGCACATGTCATGGAAGTGA

Downstream 100 bases:

>100_bases
TACGGTCTTGTCTGATGCGACGCTGGCGCGTCTTATCAGTCCTACGCAGGAGTAGAACCGTAGGTCGGATAAGGCGTTTA
CGCCGCATCCGACACGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTRGEAVASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEE
VRAGDAAAPSLDPATIAANNTEFEPEPAPVIPPKPKPVEPPKPKVEAPPAPKPVVEEKAAPTGKAYVVQLGALKNADKVN
EIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN

Sequences:

>Translated_222_residues
MTRGEAVASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEE
VRAGDAAAPSLDPATIAANNTEFEPEPAPVIPPKPKPVEPPKPKVEAPPAPKPVVEEKAAPTGKAYVVQLGALKNADKVN
EIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
>Mature_221_residues
TRGEAVASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEV
RAGDAAAPSLDPATIAANNTEFEPEPAPVIPPKPKPVEPPKPKVEAPPAPKPVVEEKAAPTGKAYVVQLGALKNADKVNE
IVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=220, Percent_Identity=87.7272727272727, Blast_Score=349, Evalue=8e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 23143; Mature: 23012

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGEAVASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
MMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVIPPKPKPVEP
CCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
PKPKVEAPPAPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTP
CCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCC
VQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
CCCEEEEEEECCCCCHHHHHCHHHHHHHHCCCCCEEEECCCC
>Mature Secondary Structure 
TRGEAVASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
MMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVIPPKPKPVEP
CCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
PKPKVEAPPAPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTP
CCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCC
VQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
CCCEEEEEEECCCCCHHHHHCHHHHHHHHCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]