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The map label for this gene is yfcV [H]

Identifier: 218548207

GI number: 218548207

Start: 842448

End: 843008

Strand: Direct

Name: yfcV [H]

Synonym: EFER_0825

Alternate gene names: 218548207

Gene position: 842448-843008 (Clockwise)

Preceding gene: 218548206

Following gene: 218548208

Centisome position: 18.36

GC content: 46.7

Gene sequence:

>561_bases
ATGAGTAAGTTCGCTAAAACTGCCGTTGCAGCCGCAATGGTAATGGGCGTAGTTGTCTCCGCGTCAGCCTTTGCTGCAGG
CAACAACGGTACTGCACGTTTCTATGGCACCATTGAAGACTCTCCGTGCTCTATCGTTCCAGACGATCACAAACTGGAAG
TGGATTTAGGCAACATTGGTGCAGAAGTACTGAAAAACAACGGGACTACCACGCCGAAAGACTTTCAGATTCGTTTGCAG
GACTGCGTATTTGATACCCAAACAACCATGGAAACGACGTTCACCGGTAACGTTTCTACGGGAAACGAGAATTACTACAC
CATTTTTAATACCGATACAGGTGCTGCGTTTAACAATGTAAGCCTGGCGATTGGTGATAAGCAAGGTACTTCCTATAAAA
GCGGTGTTGGCATTGAACAGCCGATCGTAAATGACTCAGTAACCAATAAAGGCAAACCTAAACAGACTCTGAACTTCAAA
GCCTGGTTAGTCGGTGCGGCTGGTACGCCTGACCTGGGTGGTTTTGAAGCGAATACCACCTTCCAGATTACCTATCTCTA
A

Upstream 100 bases:

>100_bases
TTCGATGGCTGGGTATTAACTCGTGATGAATTTATATATTGATTGGCCTAATAAATCATGATGTTTATATCACTTATTTA
ATATAATTTAAGGACAAATA

Downstream 100 bases:

>100_bases
GGTAATTCACCCCCATAGCATCGCGCTATGGGGGATTTTGGAACGAGTTTTTGGACTTATTATAATAATCACGGATGGAT
ACGTGTATGCCTGACCATTC

Product: fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSKFAKTAVAAAMVMGVVVSASAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDLGNIGAEVLKNNGTTTPKDFQIRLQ
DCVFDTQTTMETTFTGNVSTGNENYYTIFNTDTGAAFNNVSLAIGDKQGTSYKSGVGIEQPIVNDSVTNKGKPKQTLNFK
AWLVGAAGTPDLGGFEANTTFQITYL

Sequences:

>Translated_186_residues
MSKFAKTAVAAAMVMGVVVSASAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDLGNIGAEVLKNNGTTTPKDFQIRLQ
DCVFDTQTTMETTFTGNVSTGNENYYTIFNTDTGAAFNNVSLAIGDKQGTSYKSGVGIEQPIVNDSVTNKGKPKQTLNFK
AWLVGAAGTPDLGGFEANTTFQITYL
>Mature_185_residues
SKFAKTAVAAAMVMGVVVSASAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDLGNIGAEVLKNNGTTTPKDFQIRLQD
CVFDTQTTMETTFTGNVSTGNENYYTIFNTDTGAAFNNVSLAIGDKQGTSYKSGVGIEQPIVNDSVTNKGKPKQTLNFKA
WLVGAAGTPDLGGFEANTTFQITYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788680, Length=187, Percent_Identity=82.3529411764706, Blast_Score=292, Evalue=1e-80,
Organism=Escherichia coli, GI1789422, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19674; Mature: 19543

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFAKTAVAAAMVMGVVVSASAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDLGNIG
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCEECCCCCEEEEEECCCC
AEVLKNNGTTTPKDFQIRLQDCVFDTQTTMETTFTGNVSTGNENYYTIFNTDTGAAFNNV
HHHHHCCCCCCCCCEEEEEEHHEECCCCCEEEEEECCEECCCCCEEEEEECCCCCEECCE
SLAIGDKQGTSYKSGVGIEQPIVNDSVTNKGKPKQTLNFKAWLVGAAGTPDLGGFEANTT
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCE
FQITYL
EEEEEC
>Mature Secondary Structure 
SKFAKTAVAAAMVMGVVVSASAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDLGNIG
CHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCEECCCCCEEEEEECCCC
AEVLKNNGTTTPKDFQIRLQDCVFDTQTTMETTFTGNVSTGNENYYTIFNTDTGAAFNNV
HHHHHCCCCCCCCCEEEEEEHHEECCCCCEEEEEECCEECCCCCEEEEEECCCCCEECCE
SLAIGDKQGTSYKSGVGIEQPIVNDSVTNKGKPKQTLNFKAWLVGAAGTPDLGGFEANTT
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCE
FQITYL
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]