| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yfcZ [H]
Identifier: 218548203
GI number: 218548203
Start: 837087
End: 837395
Strand: Direct
Name: yfcZ [H]
Synonym: EFER_0821
Alternate gene names: 218548203
Gene position: 837087-837395 (Clockwise)
Preceding gene: 218548201
Following gene: 218548204
Centisome position: 18.24
GC content: 48.22
Gene sequence:
>309_bases GTGCAAATACAGAGGAAATCTACAATGAGTAAATGCAGTGCTGATGAAACCCCGGTTTGCTGCTGTATGGATGTTGGCAC CATCATGGACAACTCCGATTGCACCGCGTCATACAGCCGTGTGTTCTCTACCCGTGAAGAAGCAGAAGAAATGCTGGCGT CGCTGAGCGAGAAAGCACGTAGTGTTGAATCTGATCCGTGCAAAATTGTTCCAACCTTCACTGAAGAGTCTGATGGCGTT CGTCTGGACGTCGATTTTGTCTTCGCCTGCGAAGCTGAAATGCTGATCTTCCAGTTAGGGTTACGTTAA
Upstream 100 bases:
>100_bases AATTGTGATTTCGGTCACTTATCCGATTTTACATAATTCTCGACTGGAGCACCGTTTTTCAGCGGAGTAAAATATTCCGA ACATTTATCTGGCACCCTGG
Downstream 100 bases:
>100_bases TCCCTTCCTGTTAACGCCTCTGCCGTTTACTGCGGTAGAGGCGTTTTCTTTTGTGTCCATACTTCAATTTGCATGTGCTG CGTCTGCGGGTTATTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MQIQRKSTMSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFSTREEAEEMLASLSEKARSVESDPCKIVPTFTEESDGV RLDVDFVFACEAEMLIFQLGLR
Sequences:
>Translated_102_residues MQIQRKSTMSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFSTREEAEEMLASLSEKARSVESDPCKIVPTFTEESDGV RLDVDFVFACEAEMLIFQLGLR >Mature_102_residues MQIQRKSTMSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFSTREEAEEMLASLSEKARSVESDPCKIVPTFTEESDGV RLDVDFVFACEAEMLIFQLGLR
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family [H]
Homologues:
Organism=Escherichia coli, GI87082087, Length=94, Percent_Identity=88.2978723404255, Blast_Score=176, Evalue=4e-46, Organism=Escherichia coli, GI1790357, Length=99, Percent_Identity=42.4242424242424, Blast_Score=75, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005272 [H]
Pfam domain/function: PF04175 DUF406 [H]
EC number: NA
Molecular weight: Translated: 11353; Mature: 11353
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 12.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIQRKSTMSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFSTREEAEEMLASLSEKAR CCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVESDPCKIVPTFTEESDGVRLDVDFVFACEAEMLIFQLGLR CCCCCCCEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCC >Mature Secondary Structure MQIQRKSTMSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFSTREEAEEMLASLSEKAR CCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVESDPCKIVPTFTEESDGVRLDVDFVFACEAEMLIFQLGLR CCCCCCCEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]