| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is ypfG [H]
Identifier: 218548101
GI number: 218548101
Start: 731417
End: 732484
Strand: Direct
Name: ypfG [H]
Synonym: EFER_0713
Alternate gene names: 218548101
Gene position: 731417-732484 (Clockwise)
Preceding gene: 218548100
Following gene: 218548104
Centisome position: 15.94
GC content: 52.06
Gene sequence:
>1068_bases TTGGCTTCTGGGGTTGTATCGTCCATGCGCTATCGCGTTATTCTACTTTTCCTGCTCGGTCTGATACCAACGTCGCTGAC GTGGGCTGCACCTGCCCAACGCATGTTCTCAGACTGGCAAGTCACCTGTAATAATCAAAATTTCTGCGTAGCGCGTAACA CTGGCGAACATGGTGGGCTGGTCATGACCTTGAGCCGTAGTGCAGGTGCGCATACCGACGCGGTTTTACGTATTGATCTT GGTAGCCTCAGTACTCCAGATATTGCCGAAGAGGCAATAGCTCCGCGTTTACTTCTTGATAGCAAACCGCTGTTATTTAC AGGCGAAACGTGGAAGATCACCCCATGGCATTTAATGACCGACGATCCGGCGACAATTACCGCTTTTTTACAGCAAGTAC AGGATGCGCAAGCTATTACGCTGGATGGTGGTAACCAATCCATTTCACTGTTGGGATTAAAAGCCGCGTTACTGTTTATT GACGCGCAGCAAAAGCGCGTTGGTAGTGAAACGGCGTGGATTGAAAAGGGCAATGATCCGCCTCTTAGCGTTCCTCCCGC GCCGCCGCTGAAAGGTGTTGCGATTGTTAACCCGACACCGACACCATTAAGTCAGGAGGAGCGTAACGACCTGCTGGATT ACGGGAACTGGCGGATGAACGGTTTACGCTGTTCACTGGACCCGTTGCGTCGTGAGGTGAGTGTGACGGCGCTTACCGAT GACAAAGCATTGCTTATGATTGGTTGTGAGGCTGGCGCTTATAACACCGTTGACCTGGCGTGGATTGTTTCACGGAAAAA GCCGCTCGCCTCCCGCGCGGTACGCCTGCGTTTACCCTTCAATAACGGTCAGCAAAACAATGAACTGGAATTAATGAATG CGACGTTTGATGAAAAGTCGCGTGAGCTGGTGACATTAGCGAAAGGGCGAGGATTAACCGACTGTGGTATTCAGACGCGC TGGCGTTTTGACGGCCAGCGTTTTCGTCTGGTGCGTTACGCCGCAGAGCCTACCTGTGATAACTGGCATGGGCCAGATGC CTGGCCCACATTGTGGATCACCCGTTAA
Upstream 100 bases:
>100_bases GAAAAATAAGAATAATATATTTGGTTAATTTTGGCGCAATCCGATAAATCTTATTGAGTGAGACATCAGGCGCAACGAAG ATACCCCTTGAGTTGTAAGT
Downstream 100 bases:
>100_bases AGATATTGTGTGCACGTATCAGGCGCTTTTAACCCCCAGAACCTTATGCGCTTTTGCCACAATATTCTCGGGGGTAAAGC CAAAGAATGGGAACAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGLVMTLSRSAGAHTDAVLRIDL GSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMTDDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFI DAQQKRVGSETAWIEKGNDPPLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKSRELVTLAKGRGLTDCGIQTR WRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR
Sequences:
>Translated_355_residues MASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGLVMTLSRSAGAHTDAVLRIDL GSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMTDDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFI DAQQKRVGSETAWIEKGNDPPLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKSRELVTLAKGRGLTDCGIQTR WRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR >Mature_354_residues ASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGLVMTLSRSAGAHTDAVLRIDLG SLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMTDDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFID AQQKRVGSETAWIEKGNDPPLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTDD KALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKSRELVTLAKGRGLTDCGIQTRW RFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788809, Length=347, Percent_Identity=83.2853025936599, Blast_Score=596, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009560 [H]
Pfam domain/function: PF06674 DUF1176 [H]
EC number: NA
Molecular weight: Translated: 39275; Mature: 39144
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCEEEECCCCCCCCE VMTLSRSAGAHTDAVLRIDLGSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMT EEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCEEEECCCCEEEECCEEEECCEEEEC DDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFIDAQQKRVGSETAWIEKGNDP CCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEEEEECHHHHCCCCEEEEECCCCC PLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCEEECCHHHCCEEEEEEEEC DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKS CCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCC RELVTLAKGRGLTDCGIQTRWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR CEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure ASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCEEEECCCCCCCCE VMTLSRSAGAHTDAVLRIDLGSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMT EEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCEEEECCCCEEEECCEEEECCEEEEC DDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFIDAQQKRVGSETAWIEKGNDP CCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEEEEECHHHHCCCCEEEEECCCCC PLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCEEECCHHHCCEEEEEEEEC DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKS CCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCC RELVTLAKGRGLTDCGIQTRWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR CEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]