Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

Click here to switch to the map view.

The map label for this gene is ypfG [H]

Identifier: 218548101

GI number: 218548101

Start: 731417

End: 732484

Strand: Direct

Name: ypfG [H]

Synonym: EFER_0713

Alternate gene names: 218548101

Gene position: 731417-732484 (Clockwise)

Preceding gene: 218548100

Following gene: 218548104

Centisome position: 15.94

GC content: 52.06

Gene sequence:

>1068_bases
TTGGCTTCTGGGGTTGTATCGTCCATGCGCTATCGCGTTATTCTACTTTTCCTGCTCGGTCTGATACCAACGTCGCTGAC
GTGGGCTGCACCTGCCCAACGCATGTTCTCAGACTGGCAAGTCACCTGTAATAATCAAAATTTCTGCGTAGCGCGTAACA
CTGGCGAACATGGTGGGCTGGTCATGACCTTGAGCCGTAGTGCAGGTGCGCATACCGACGCGGTTTTACGTATTGATCTT
GGTAGCCTCAGTACTCCAGATATTGCCGAAGAGGCAATAGCTCCGCGTTTACTTCTTGATAGCAAACCGCTGTTATTTAC
AGGCGAAACGTGGAAGATCACCCCATGGCATTTAATGACCGACGATCCGGCGACAATTACCGCTTTTTTACAGCAAGTAC
AGGATGCGCAAGCTATTACGCTGGATGGTGGTAACCAATCCATTTCACTGTTGGGATTAAAAGCCGCGTTACTGTTTATT
GACGCGCAGCAAAAGCGCGTTGGTAGTGAAACGGCGTGGATTGAAAAGGGCAATGATCCGCCTCTTAGCGTTCCTCCCGC
GCCGCCGCTGAAAGGTGTTGCGATTGTTAACCCGACACCGACACCATTAAGTCAGGAGGAGCGTAACGACCTGCTGGATT
ACGGGAACTGGCGGATGAACGGTTTACGCTGTTCACTGGACCCGTTGCGTCGTGAGGTGAGTGTGACGGCGCTTACCGAT
GACAAAGCATTGCTTATGATTGGTTGTGAGGCTGGCGCTTATAACACCGTTGACCTGGCGTGGATTGTTTCACGGAAAAA
GCCGCTCGCCTCCCGCGCGGTACGCCTGCGTTTACCCTTCAATAACGGTCAGCAAAACAATGAACTGGAATTAATGAATG
CGACGTTTGATGAAAAGTCGCGTGAGCTGGTGACATTAGCGAAAGGGCGAGGATTAACCGACTGTGGTATTCAGACGCGC
TGGCGTTTTGACGGCCAGCGTTTTCGTCTGGTGCGTTACGCCGCAGAGCCTACCTGTGATAACTGGCATGGGCCAGATGC
CTGGCCCACATTGTGGATCACCCGTTAA

Upstream 100 bases:

>100_bases
GAAAAATAAGAATAATATATTTGGTTAATTTTGGCGCAATCCGATAAATCTTATTGAGTGAGACATCAGGCGCAACGAAG
ATACCCCTTGAGTTGTAAGT

Downstream 100 bases:

>100_bases
AGATATTGTGTGCACGTATCAGGCGCTTTTAACCCCCAGAACCTTATGCGCTTTTGCCACAATATTCTCGGGGGTAAAGC
CAAAGAATGGGAACAGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGLVMTLSRSAGAHTDAVLRIDL
GSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMTDDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFI
DAQQKRVGSETAWIEKGNDPPLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD
DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKSRELVTLAKGRGLTDCGIQTR
WRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR

Sequences:

>Translated_355_residues
MASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGLVMTLSRSAGAHTDAVLRIDL
GSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMTDDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFI
DAQQKRVGSETAWIEKGNDPPLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD
DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKSRELVTLAKGRGLTDCGIQTR
WRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR
>Mature_354_residues
ASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGLVMTLSRSAGAHTDAVLRIDLG
SLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMTDDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFID
AQQKRVGSETAWIEKGNDPPLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTDD
KALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKSRELVTLAKGRGLTDCGIQTRW
RFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788809, Length=347, Percent_Identity=83.2853025936599, Blast_Score=596, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009560 [H]

Pfam domain/function: PF06674 DUF1176 [H]

EC number: NA

Molecular weight: Translated: 39275; Mature: 39144

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCEEEECCCCCCCCE
VMTLSRSAGAHTDAVLRIDLGSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMT
EEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCEEEECCCCEEEECCEEEECCEEEEC
DDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFIDAQQKRVGSETAWIEKGNDP
CCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEEEEECHHHHCCCCEEEEECCCCC
PLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD
CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCEEECCHHHCCEEEEEEEEC
DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKS
CCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCC
RELVTLAKGRGLTDCGIQTRWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR
CEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
ASGVVSSMRYRVILLFLLGLIPTSLTWAAPAQRMFSDWQVTCNNQNFCVARNTGEHGGL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCEEEECCCCCCCCE
VMTLSRSAGAHTDAVLRIDLGSLSTPDIAEEAIAPRLLLDSKPLLFTGETWKITPWHLMT
EEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCEEEECCCCEEEECCEEEECCEEEEC
DDPATITAFLQQVQDAQAITLDGGNQSISLLGLKAALLFIDAQQKRVGSETAWIEKGNDP
CCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEEEEECHHHHCCCCEEEEECCCCC
PLSVPPAPPLKGVAIVNPTPTPLSQEERNDLLDYGNWRMNGLRCSLDPLRREVSVTALTD
CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCEEECCHHHCCEEEEEEEEC
DKALLMIGCEAGAYNTVDLAWIVSRKKPLASRAVRLRLPFNNGQQNNELELMNATFDEKS
CCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCC
RELVTLAKGRGLTDCGIQTRWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR
CEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]