| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is gutQ [H]
Identifier: 218547784
GI number: 218547784
Start: 383291
End: 384256
Strand: Reverse
Name: gutQ [H]
Synonym: EFER_0370
Alternate gene names: 218547784
Gene position: 384256-383291 (Counterclockwise)
Preceding gene: 218547786
Following gene: 218547782
Centisome position: 8.37
GC content: 56.52
Gene sequence:
>966_bases ATGAGTGAAGCACTACTGAACGCGGGACGTCAGACGTTAATGCTGGAGTTGCAGGAAGCAAGCCGTTTACCAGAACGTCT GGGCGATGATTTTGTTCGCGCCGCCAATATCATCCTGCACTGCGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGG GCCACATTGGTAAGAAAATCGCCGCAACGCTTGCCAGTACCGGCACGCCTGCTTTTTTTGTCCATCCGGCAGAAGCACTG CACGGCGATCTGGGGATGATTGAAAGCCGCGATGTGATGCTGTTTATCTCTTACTCCGGTGGCGCAAAGGAACTGGATCT GATTATTCCGCGTCTGGAAGACAAATCTATCGCGCTGCTGGCGATGACCGGTAAACTGACATCACCGCTGGGCCTGGCGG CGAAAGCGGTGCTGGATATCTCTGTAGAACGCGAAGCCTGCCCGATGCATCTTGCGCCGACCTCCAGCACCGTCAATACC CTGATGATGGGCGACGCGCTGGCGATGGCGGTCATGCAGGCGCGCGGATTTAATGAAGAAGATTTTGCCCGCTCCCACCC AGCTGGGGCACTGGGCGCTCGCTTGCTGAACAAAGTGCATCATCTGATGCGCCGTGATGACGCAATCCCGCAGGTGGCGT TAACCGCCAGCGTGATGGATGCGATGCTGGAACTCAGTCGCACCGGTCTGGGACTGGTAGCCGTGTGCGACGATCAACGA CTGGTGAAAGGCGTCTTTACCGACGGGGATTTACGTCGCTGGCTGGTTGGCGGCGGTGCACTCACCACGCCAGTTAATGA AGCGATGACGGCAGGCGGCACGACGTTGCTATCGCAAAGTCGCGCCATCGACGCCAAAGAGATCCTGATGAAACGCAAAA TCACCGCCGCACCGGTGGTAGATGAAAACGGCAAACTCGTCGGCGCGATTAACCTGCAGGATTTCTATCAGGCCGGGATT ATTTAA
Upstream 100 bases:
>100_bases CATCAGTTGTTTCACCAGCCATGGCATTGGATAATGAGCGTTCAATCTGGCTACCAATCCCTGGCTGGAATAAATAAATG GACCTTAACCGGAGAGAGCA
Downstream 100 bases:
>100_bases TCCTTCAGCCCCAGACGTTTCGCCAACCGATGCAAGTTGGCGACGTCGGTTTCCAGCATCCGTGCGCTGGCAGCCCAGTT GTGATGATTTTGTGCCAGTG
Product: D-arabinose 5-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKLTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR LVKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVVDENGKLVGAINLQDFYQAGI I
Sequences:
>Translated_321_residues MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKLTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR LVKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVVDENGKLVGAINLQDFYQAGI I >Mature_320_residues SEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALH GDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKLTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTL MMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRL VKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVVDENGKLVGAINLQDFYQAGII
Specific function: Not Known. [C]
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI87082151, Length=321, Percent_Identity=97.5077881619938, Blast_Score=631, Evalue=0.0, Organism=Escherichia coli, GI1789588, Length=316, Percent_Identity=45.5696202531646, Blast_Score=280, Evalue=7e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR004800 - InterPro: IPR001347 [H]
Pfam domain/function: PF00571 CBS; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 34060; Mature: 33929
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCCHHHHCCCHHEEEEHHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKLTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EEECCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LVKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVV HHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCEE DENGKLVGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC >Mature Secondary Structure SEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCHHHHCCCHHEEEEHHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKLTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EEECCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LVKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVV HHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCEE DENGKLVGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2134185 [H]