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The map label for this gene is ygcH [H]

Identifier: 218547724

GI number: 218547724

Start: 325066

End: 325665

Strand: Direct

Name: ygcH [H]

Synonym: EFER_0307

Alternate gene names: 218547724

Gene position: 325066-325665 (Clockwise)

Preceding gene: 218547723

Following gene: 218547725

Centisome position: 7.08

GC content: 44.33

Gene sequence:

>600_bases
ATGTATCTCAGTAAAATCATCATTGCCAGGGCCTGGAGCAGGGATCTTTACCAACTTCACCAGGGATTATGGCATTTATT
TCCAAATAGACCGGATGCTGCTCGTGATTTTCTTTTTCATGTTGAGAAGCGAAACACACCAGAAGGCTGTCATGTTTTAT
TGCAGTCAGCGCAAATGCCTGTTTCAACTGCCGTTGCGACAGTCATTAAAACTAAACAGGTTGAATTTCAACTTCAGGTT
GGTGTTCCACTCTATTTTCGACTTCGGGCAAATCCGATCAAAACTATTCTCGACAATCAAAAGCGTCTGGACAGTAAAGG
GAATATTAAACGCTGTCGGGTTCCGTTAATAAAAGAAGCAGAACAAATCGCGTGGTTGCAACGTAAATTGGGCAATGCGG
CGCGCGTTGAAGATGTGCATCCCATATCGGAACGGCCACAGTATTTTTCTGGGGAAGGTAAAAATGGAAAAATCCAAACG
GTTTGCTTTGAAGGTGTGCTCACCATCAACGACGCGCCAGCGTTAATAGATCTTTTACAGCAAGGTATTGGGCCAGCCAA
ATCGATGGGATGTGGTTTGCTATCTTTGGCTCCACTGTGA

Upstream 100 bases:

>100_bases
GACGGGCATCATTTAAAATTTACGGTGCGCGACGAACCGATGATCACCTTACCTCGACAATTTGCTTCCCGAGAATGGTA
TGTGATTAAAGGAGGTATGG

Downstream 100 bases:

>100_bases
TTGAGGTGTAATAAAATGACCTGGCTTCCTCTTAACCCCATTCCACTCAAAGATCGCGTCTCCATGATCTTTCTGCAATA
TGGGCAGATCGATGTAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MYLSKIIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQV
GVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGEGKNGKIQT
VCFEGVLTINDAPALIDLLQQGIGPAKSMGCGLLSLAPL

Sequences:

>Translated_199_residues
MYLSKIIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQV
GVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGEGKNGKIQT
VCFEGVLTINDAPALIDLLQQGIGPAKSMGCGLLSLAPL
>Mature_199_residues
MYLSKIIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQV
GVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGEGKNGKIQT
VCFEGVLTINDAPALIDLLQQGIGPAKSMGCGLLSLAPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789114, Length=199, Percent_Identity=97.9899497487437, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010179 [H]

Pfam domain/function: PF08798 CRISPR_assoc [H]

EC number: NA

Molecular weight: Translated: 22362; Mature: 22362

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSKIIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC
VSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEA
HHHHHHHHHHHHEEEEEEEECCCEEEEEECCHHHHHHCCHHHCCCCCCCEECCCCHHHHH
EQIAWLQRKLGNAARVEDVHPISERPQYFSGEGKNGKIQTVCFEGVLTINDAPALIDLLQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCHHHHHHHH
QGIGPAKSMGCGLLSLAPL
HCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MYLSKIIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC
VSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEA
HHHHHHHHHHHHEEEEEEEECCCEEEEEECCHHHHHHCCHHHCCCCCCCEECCCCHHHHH
EQIAWLQRKLGNAARVEDVHPISERPQYFSGEGKNGKIQTVCFEGVLTINDAPALIDLLQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCHHHHHHHH
QGIGPAKSMGCGLLSLAPL
HCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]