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The map label for this gene is yafE [H]

Identifier: 218547660

GI number: 218547660

Start: 253424

End: 254194

Strand: Direct

Name: yafE [H]

Synonym: EFER_0239

Alternate gene names: 218547660

Gene position: 253424-254194 (Clockwise)

Preceding gene: 218547659

Following gene: 218547663

Centisome position: 5.52

GC content: 50.06

Gene sequence:

>771_bases
ATGGCAACACAATCCCACCATGACCACGTAGAAAAGCAGTTTAGCTCGCAGGCCTGTGAGTATTTAACCAGTACCGTACA
TGCATCCGGGCGAGATTTACAGCGCCTGGCGGTGCGTCTGGCTGATTATCCTGATGCAACTGTACTGGATATGGGCTGCG
GTGCAGGGCATGCCAGCTTTGTCGTTGCGCAGACCGTGAGCGAGGTGGTGGCGTATGACTTATCTGCCCAAATGCTGGAT
GTCGTGGCACAAGCTGCCGAAGCCCGGCAACTGAAAAATATCACCACCCGCCAGGGATATGCCGAAAGTCTGCCATTTGC
CGATAACGCCTTTGATATTGTTATCAGCCGTTATTCTGCCCATCATTGGCATGATGTCGGCGCAGCACTGCGCGAAGTGA
GTCGGGTATTGAAGCCCGGCGGTATGCTGATTGTGATGGACGTCATGTCGCCAGGACATCCGGTACGTGATATCTGGTTA
CAGACGGTAGAAGCATTACGCGATACCTCTCACGTACGAAACTACGCCAGCGGTGAGTGGTTGACGTTAATCAATGAAGC
CAATCTGATAGTTGATAATTTAATTACAGATAAGTTACCGCTGGAATTTTCTTCATGGGTCGTGAGAATGCGTACGCCAG
AAGCGTTAGTAGACGCTATTCGCATTTACCAACAGAGCGCATCGACAGAGGTGAAAACGTATTTTGCCTTGCAGAATGAT
GGCTCTTTCACCAGTGATATCATCATGGTAGAAGCACATAAAGCGGCATAA

Upstream 100 bases:

>100_bases
GTCCCGGCAAGCCTGATAAATAAGGTATGTCAGGTCTGCCACAGGGCAGACCAACGTTTGGCGCTGCCCTTTTATACTCA
AACAACAAAAGGACAGCGCA

Downstream 100 bases:

>100_bases
ATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAA
CAACGTCAGCTTATCGCCTG

Product: S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MATQSHHDHVEKQFSSQACEYLTSTVHASGRDLQRLAVRLADYPDATVLDMGCGAGHASFVVAQTVSEVVAYDLSAQMLD
VVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVSRVLKPGGMLIVMDVMSPGHPVRDIWL
QTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVVRMRTPEALVDAIRIYQQSASTEVKTYFALQND
GSFTSDIIMVEAHKAA

Sequences:

>Translated_256_residues
MATQSHHDHVEKQFSSQACEYLTSTVHASGRDLQRLAVRLADYPDATVLDMGCGAGHASFVVAQTVSEVVAYDLSAQMLD
VVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVSRVLKPGGMLIVMDVMSPGHPVRDIWL
QTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVVRMRTPEALVDAIRIYQQSASTEVKTYFALQND
GSFTSDIIMVEAHKAA
>Mature_255_residues
ATQSHHDHVEKQFSSQACEYLTSTVHASGRDLQRLAVRLADYPDATVLDMGCGAGHASFVVAQTVSEVVAYDLSAQMLDV
VAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVSRVLKPGGMLIVMDVMSPGHPVRDIWLQ
TVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVVRMRTPEALVDAIRIYQQSASTEVKTYFALQNDG
SFTSDIIMVEAHKAA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=205, Percent_Identity=91.219512195122, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28314; Mature: 28183

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQSHHDHVEKQFSSQACEYLTSTVHASGRDLQRLAVRLADYPDATVLDMGCGAGHASF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHH
VVAQTVSEVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCC
HHWHDVGAALREVSRVLKPGGMLIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEW
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LTLINEANLIVDNLITDKLPLEFSSWVVRMRTPEALVDAIRIYQQSASTEVKTYFALQND
EEEECCCHHHHHHHHHCCCCCCHHHHEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECC
GSFTSDIIMVEAHKAA
CCCCCCEEEEEECCCC
>Mature Secondary Structure 
ATQSHHDHVEKQFSSQACEYLTSTVHASGRDLQRLAVRLADYPDATVLDMGCGAGHASF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHH
VVAQTVSEVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCC
HHWHDVGAALREVSRVLKPGGMLIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEW
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LTLINEANLIVDNLITDKLPLEFSSWVVRMRTPEALVDAIRIYQQSASTEVKTYFALQND
EEEECCCHHHHHHHHHCCCCCCHHHHEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECC
GSFTSDIIMVEAHKAA
CCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]