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The map label for this gene is yaeJ [H]

Identifier: 218547647

GI number: 218547647

Start: 236297

End: 236719

Strand: Direct

Name: yaeJ [H]

Synonym: EFER_0215

Alternate gene names: 218547647

Gene position: 236297-236719 (Clockwise)

Preceding gene: 218547646

Following gene: 218547648

Centisome position: 5.15

GC content: 53.43

Gene sequence:

>423_bases
ATGATTATGATTTCCCGACATGTTGCTATCCCCGATGGCGAGTTTGAGATCACTGCTATTCGTGCACAGGGCGCGGGCGG
ACAGCATGTTAATAAGACCTCAACGGCTATTCATCTGCGTTTTGACATTCGAGCGTCCAGCCTGCCAGAGTATTACAAAG
AGCGCCTGCTCGCTGCCAGCCATCATCTGATTAGCAGCGATGGAGTGATAGTCATCAAGGCACAGGAATACCGCAGCCAG
GAACTGAACCGCGAAGCGGCGCTGGCTCGGCTGGTGGCAGTGATTAAAGAATTAACAACAGAACAAAAAGCCCGACGACC
GACACGACCTACCCGCGCATCAAAAGAGCGCAGGCTGGTATCGAAAGCACAAAAATCAAGCGTGAAGGCGTTGCGCGGCA
AAGTGCGCGGCGGTCGGGAATAA

Upstream 100 bases:

>100_bases
GTACCATGACGCTGCAGGCAACGATTCAGGATGGGGTGATTTGGTTATCGGATGATAAGAATAATCTGGAAGTAAACTTG
ATCGCCTGGCAACAACCTTC

Downstream 100 bases:

>100_bases
AAAGAAGGAATGGATGGTGAAAAAAGCGATAGTGACAGCGATGGCTGTAATCAGCCTCTTTACACTGATGGGATGTAATA
ATCGGGCCGAAGTCGATACG

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIMISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQ
ELNREAALARLVAVIKELTTEQKARRPTRPTRASKERRLVSKAQKSSVKALRGKVRGGRE

Sequences:

>Translated_140_residues
MIMISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQ
ELNREAALARLVAVIKELTTEQKARRPTRPTRASKERRLVSKAQKSSVKALRGKVRGGRE
>Mature_140_residues
MIMISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQ
ELNREAALARLVAVIKELTTEQKARRPTRPTRASKERRLVSKAQKSSVKALRGKVRGGRE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=140, Percent_Identity=95, Blast_Score=268, Evalue=1e-73,
Organism=Drosophila melanogaster, GI19921098, Length=109, Percent_Identity=35.7798165137615, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15637; Mature: 15637

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS
CEEEECEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKARRPTRPTRASKERRLV
HHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SKAQKSSVKALRGKVRGGRE
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIMISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS
CEEEECEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKARRPTRPTRASKERRLV
HHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SKAQKSSVKALRGKVRGGRE
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]