| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yaeI [H]
Identifier: 218547620
GI number: 218547620
Start: 206006
End: 206821
Strand: Reverse
Name: yaeI [H]
Synonym: EFER_0187
Alternate gene names: 218547620
Gene position: 206821-206006 (Counterclockwise)
Preceding gene: 218547621
Following gene: 218547619
Centisome position: 4.51
GC content: 50.12
Gene sequence:
>816_bases ATGATGATCACACGCAGGCGTTTTTTACAGGCTGCCGCCGCGACGTTAACGGTGAGTTCAAGTTTCGGTTATATGCATTA CCTGGAACCCGGCTGGCTTGAATTAACCCATCACCGCTTCGCCTTTTTTGAAGAAAAAGCCGCACCATTCAAAATTCTGT TTCTGGCCGATCTCCATTATTCCCGCTTTGTTCCGCTTACCTTGATTTCAGACGCCATTAATCTTGGAGTTGCACAAAAG CCCGATTTGATATTGCTGGGCGGTGATTACGTATTATTCGATATGCCGCTGAATTTTTCGGCGTTTGCTGACGTACTCTC CCCCCTTGCCGAATGTGCGCCGACGTTTGCCTGTTATGGCAATCACGATCGCCCCGTGGGAACGGTGAAAAATCGCTTGA TTGGCGAGGCGTTAAAGTCGGCGGGGATCACGGTGTTATTTAACGAATCCACGCTAATCACCACTCAAAAGCAGCAATTT GAACTGGTTGGCACTGGTGATTTATGGGCTGGACAATGCAAACCGCCTCCCGCCAGCGAAGCAAATCTGCCACGACTGGT GCTGGCACATAATCCCGACAGCAAAGAAGTCATGCGTAATGAAAAGTGGGATCTGATGCTCTGTGGTCACACTCACGGCG GGCAGTTACGCATACCGTTGGTTGGTGAGCCTTTTGCGCCCATAGAAGATAAACGCTACATCGCTGGTTTAAACGCCTTT GGTGAGCGACAAATTTACACGACTCGGGGTGTCGGAAGTTTGTATGGCTTGCGTCTGAATTGCCGCCCGGAAGTGACGAT CATGGAACTGGTGTAG
Upstream 100 bases:
>100_bases AAACTCGTGGCAAAGTCGGCATTAACGAACTGCTACGTACCATCGACTAAAAGTCAGTACACGGGCAGCACGACGCTGCC CGATTTTTTTACAGGGATGA
Downstream 100 bases:
>100_bases AAAGCGAATTCTCTTATCAGAATAAAGCAGGTAATTTTTTGATTTTTAGACCATGATAAAAGTCTGGAAGAAAAGGCTTC CTGCGATCTCCGTCGAGCTA
Product: phosphodiesterase YaeI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MMITRRRFLQAAAATLTVSSSFGYMHYLEPGWLELTHHRFAFFEEKAAPFKILFLADLHYSRFVPLTLISDAINLGVAQK PDLILLGGDYVLFDMPLNFSAFADVLSPLAECAPTFACYGNHDRPVGTVKNRLIGEALKSAGITVLFNESTLITTQKQQF ELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRNEKWDLMLCGHTHGGQLRIPLVGEPFAPIEDKRYIAGLNAF GERQIYTTRGVGSLYGLRLNCRPEVTIMELV
Sequences:
>Translated_271_residues MMITRRRFLQAAAATLTVSSSFGYMHYLEPGWLELTHHRFAFFEEKAAPFKILFLADLHYSRFVPLTLISDAINLGVAQK PDLILLGGDYVLFDMPLNFSAFADVLSPLAECAPTFACYGNHDRPVGTVKNRLIGEALKSAGITVLFNESTLITTQKQQF ELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRNEKWDLMLCGHTHGGQLRIPLVGEPFAPIEDKRYIAGLNAF GERQIYTTRGVGSLYGLRLNCRPEVTIMELV >Mature_271_residues MMITRRRFLQAAAATLTVSSSFGYMHYLEPGWLELTHHRFAFFEEKAAPFKILFLADLHYSRFVPLTLISDAINLGVAQK PDLILLGGDYVLFDMPLNFSAFADVLSPLAECAPTFACYGNHDRPVGTVKNRLIGEALKSAGITVLFNESTLITTQKQQF ELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRNEKWDLMLCGHTHGGQLRIPLVGEPFAPIEDKRYIAGLNAF GERQIYTTRGVGSLYGLRLNCRPEVTIMELV
Specific function: Shows phosphodiesterase activity, hydrolyzing phosphodiester bond in the artificial chromogenic substrate bis-p- nitrophenyl phosphate (bis-pNPP) [H]
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081695, Length=270, Percent_Identity=85.5555555555556, Blast_Score=493, Evalue=1e-141, Organism=Caenorhabditis elegans, GI115535030, Length=220, Percent_Identity=29.0909090909091, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115535028, Length=220, Percent_Identity=29.0909090909091, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 30140; Mature: 30140
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMITRRRFLQAAAATLTVSSSFGYMHYLEPGWLELTHHRFAFFEEKAAPFKILFLADLHY CCCCHHHHHHHHHHEEEEECCCCEEEECCCCCEEEECHHEEEECCCCCCEEEEEEEECCC SRFVPLTLISDAINLGVAQKPDLILLGGDYVLFDMPLNFSAFADVLSPLAECAPTFACYG CCEEHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC NHDRPVGTVKNRLIGEALKSAGITVLFNESTLITTQKQQFELVGTGDLWAGQCKPPPASE CCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCC ANLPRLVLAHNPDSKEVMRNEKWDLMLCGHTHGGQLRIPLVGEPFAPIEDKRYIAGLNAF CCCCEEEEEECCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCC GERQIYTTRGVGSLYGLRLNCRPEVTIMELV CCCEEEEECCCCCEEEEEEECCCCEEEEEEC >Mature Secondary Structure MMITRRRFLQAAAATLTVSSSFGYMHYLEPGWLELTHHRFAFFEEKAAPFKILFLADLHY CCCCHHHHHHHHHHEEEEECCCCEEEECCCCCEEEECHHEEEECCCCCCEEEEEEEECCC SRFVPLTLISDAINLGVAQKPDLILLGGDYVLFDMPLNFSAFADVLSPLAECAPTFACYG CCEEHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC NHDRPVGTVKNRLIGEALKSAGITVLFNESTLITTQKQQFELVGTGDLWAGQCKPPPASE CCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCC ANLPRLVLAHNPDSKEVMRNEKWDLMLCGHTHGGQLRIPLVGEPFAPIEDKRYIAGLNAF CCCCEEEEEECCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCC GERQIYTTRGVGSLYGLRLNCRPEVTIMELV CCCEEEEECCCCCEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]