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The map label for this gene is yadC [H]

Identifier: 218547591

GI number: 218547591

Start: 171686

End: 172972

Strand: Reverse

Name: yadC [H]

Synonym: EFER_0157

Alternate gene names: 218547591

Gene position: 172972-171686 (Counterclockwise)

Preceding gene: 218547592

Following gene: 218547590

Centisome position: 3.77

GC content: 39.78

Gene sequence:

>1287_bases
ATGTTAACGCTAAAAATCGTATATAAAACGCAAGCATTTTTAAAGTGCTGCATTCTGCTCTTATTATCTCTTTCTAGTAT
TTCCTTCGCGGCTAACACTGGTTTTGTTGTAGGAAATCCCCCCCCATCGTCCACTAGTCTGGCTGGGCCCTCAGGTAATG
GAAAAGCAACTTTCAGATATGCCACCATCACAAACAACCTAATTTTTTATAAACCTACAGGCTCTGGCATTAATCAAACA
GGAGTAAAACTATACTGGGCGGAATTAGATAGTGCGGGTGGTAGTGGCGGAACAGGGGTATTGTACTGTAATACCAGTGG
GAATGCCAGTGGTGGTGATATGACTATTGAAAATGCCATGGTGTATTCAGGTAAAAACTATAACGGGCATAAGTTATTTA
GCACATCAGTGCCAGGTCTTTATTACACACTGTTAATTTCAAATGTCTGGTCAGCCTATAGTACGCTAACGAACATCGGC
TCCGGTTTATATATTGGTGATAGTAATAATCCCAAGCAGTATTTTGCATTTCGCATCACAGATAGTGATTTACAGAGAAA
TGGATGTAATAAGGCTAACAGTACCAGCAGATACTGGGCTATTGGTGGCGTTATGCAAAGCCTTACCGTCGAATTTTATA
CTGACTCCTCTTTCGATCCCGTACAAAACCAGAAGGTTCAATTGTTACGTACTCGCGACTATCTTTATGCTTTTCATGCT
GAAGGCGCTGGCATTGGCATTAATGAACATAGTTATTTTCTTTTTATAGATTTTGATCTAACTAATGTAACAATTACATT
ACCTACATGCTTCACCTCCGTTTTGAGTGGTTCAGCTGTCAGTGGCTCAACAGTAAAAATGGGTGAATATACTTCCCAAC
AAATAAAAAATGGTGCAACCCCAGTTCCTTTTGATATTAACTTACAAAACTGCATCCGTGTTCGTAATATTGAAACAAAA
CTCGTCTCCACAAAAATCGGCACAGAAAACAAGAAACTTCTGGGTAATACGCGCACAGGTAATGATGCGGCAAAAGGAGT
TGGTGTATTAATTGAAGGGTTAGCAACCAACAAAAGTGTAAAAATGATACTGGAACCCAATGTTTCAACATCTGTTTATA
AAGATTACGAAACAGAAAATGATACCACTGATGGGATTTACCCAGATCATGGTAACGGTACTTCACAACCTCTTCATTTC
CAGGCGACCTTACAACAAGACGGAAATATTCCTATAGAGTCAGGTGAGTTAAAAGCCACCAGTACTTTTCAGGTGACCTA
CCCCTGA

Upstream 100 bases:

>100_bases
AAAAGTTAACCCAGCACTTAACATTACATCCGGTCAAGTCAAAAGTACTGTACTGGTCGACGTCTACTATGAGTAATCTC
TAATATAAGAAGATAATAAT

Downstream 100 bases:

>100_bases
TAGCATCGTTGCACCGCCTGATAATGGCGGTGCAACAACAGAGAAATCATTGCCCCCACCAATGTGACTGATAAAATGCA
AACAGCACAACATCATTTAT

Product: fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MLTLKIVYKTQAFLKCCILLLLSLSSISFAANTGFVVGNPPPSSTSLAGPSGNGKATFRYATITNNLIFYKPTGSGINQT
GVKLYWAELDSAGGSGGTGVLYCNTSGNASGGDMTIENAMVYSGKNYNGHKLFSTSVPGLYYTLLISNVWSAYSTLTNIG
SGLYIGDSNNPKQYFAFRITDSDLQRNGCNKANSTSRYWAIGGVMQSLTVEFYTDSSFDPVQNQKVQLLRTRDYLYAFHA
EGAGIGINEHSYFLFIDFDLTNVTITLPTCFTSVLSGSAVSGSTVKMGEYTSQQIKNGATPVPFDINLQNCIRVRNIETK
LVSTKIGTENKKLLGNTRTGNDAAKGVGVLIEGLATNKSVKMILEPNVSTSVYKDYETENDTTDGIYPDHGNGTSQPLHF
QATLQQDGNIPIESGELKATSTFQVTYP

Sequences:

>Translated_428_residues
MLTLKIVYKTQAFLKCCILLLLSLSSISFAANTGFVVGNPPPSSTSLAGPSGNGKATFRYATITNNLIFYKPTGSGINQT
GVKLYWAELDSAGGSGGTGVLYCNTSGNASGGDMTIENAMVYSGKNYNGHKLFSTSVPGLYYTLLISNVWSAYSTLTNIG
SGLYIGDSNNPKQYFAFRITDSDLQRNGCNKANSTSRYWAIGGVMQSLTVEFYTDSSFDPVQNQKVQLLRTRDYLYAFHA
EGAGIGINEHSYFLFIDFDLTNVTITLPTCFTSVLSGSAVSGSTVKMGEYTSQQIKNGATPVPFDINLQNCIRVRNIETK
LVSTKIGTENKKLLGNTRTGNDAAKGVGVLIEGLATNKSVKMILEPNVSTSVYKDYETENDTTDGIYPDHGNGTSQPLHF
QATLQQDGNIPIESGELKATSTFQVTYP
>Mature_428_residues
MLTLKIVYKTQAFLKCCILLLLSLSSISFAANTGFVVGNPPPSSTSLAGPSGNGKATFRYATITNNLIFYKPTGSGINQT
GVKLYWAELDSAGGSGGTGVLYCNTSGNASGGDMTIENAMVYSGKNYNGHKLFSTSVPGLYYTLLISNVWSAYSTLTNIG
SGLYIGDSNNPKQYFAFRITDSDLQRNGCNKANSTSRYWAIGGVMQSLTVEFYTDSSFDPVQNQKVQLLRTRDYLYAFHA
EGAGIGINEHSYFLFIDFDLTNVTITLPTCFTSVLSGSAVSGSTVKMGEYTSQQIKNGATPVPFDINLQNCIRVRNIETK
LVSTKIGTENKKLLGNTRTGNDAAKGVGVLIEGLATNKSVKMILEPNVSTSVYKDYETENDTTDGIYPDHGNGTSQPLHF
QATLQQDGNIPIESGELKATSTFQVTYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786328, Length=413, Percent_Identity=62.7118644067797, Blast_Score=496, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR017014 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 46165; Mature: 46165

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLKIVYKTQAFLKCCILLLLSLSSISFAANTGFVVGNPPPSSTSLAGPSGNGKATFRY
CEEEEEEECHHHHHHHHHHHHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEE
ATITNNLIFYKPTGSGINQTGVKLYWAELDSAGGSGGTGVLYCNTSGNASGGDMTIENAM
EEEECCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEE
VYSGKNYNGHKLFSTSVPGLYYTLLISNVWSAYSTLTNIGSGLYIGDSNNPKQYFAFRIT
EEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEE
DSDLQRNGCNKANSTSRYWAIGGVMQSLTVEFYTDSSFDPVQNQKVQLLRTRDYLYAFHA
CCHHHHCCCCCCCCCCEEEEEHHHHEEEEEEEEECCCCCCCCCCEEEEEEEECEEEEEEC
EGAGIGINEHSYFLFIDFDLTNVTITLPTCFTSVLSGSAVSGSTVKMGEYTSQQIKNGAT
CCCCCCCCCCEEEEEEEEEECEEEEECHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCC
PVPFDINLQNCIRVRNIETKLVSTKIGTENKKLLGNTRTGNDAAKGVGVLIEGLATNKSV
CCEEECCHHHHEEEECCEEEEEEEECCCCCCEEECCCCCCCHHHCCCEEEEEECCCCCEE
KMILEPNVSTSVYKDYETENDTTDGIYPDHGNGTSQPLHFQATLQQDGNIPIESGELKAT
EEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCEEEE
STFQVTYP
EEEEEECC
>Mature Secondary Structure
MLTLKIVYKTQAFLKCCILLLLSLSSISFAANTGFVVGNPPPSSTSLAGPSGNGKATFRY
CEEEEEEECHHHHHHHHHHHHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEE
ATITNNLIFYKPTGSGINQTGVKLYWAELDSAGGSGGTGVLYCNTSGNASGGDMTIENAM
EEEECCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEE
VYSGKNYNGHKLFSTSVPGLYYTLLISNVWSAYSTLTNIGSGLYIGDSNNPKQYFAFRIT
EEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEE
DSDLQRNGCNKANSTSRYWAIGGVMQSLTVEFYTDSSFDPVQNQKVQLLRTRDYLYAFHA
CCHHHHCCCCCCCCCCEEEEEHHHHEEEEEEEEECCCCCCCCCCEEEEEEEECEEEEEEC
EGAGIGINEHSYFLFIDFDLTNVTITLPTCFTSVLSGSAVSGSTVKMGEYTSQQIKNGAT
CCCCCCCCCCEEEEEEEEEECEEEEECHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCC
PVPFDINLQNCIRVRNIETKLVSTKIGTENKKLLGNTRTGNDAAKGVGVLIEGLATNKSV
CCEEECCHHHHEEEECCEEEEEEEECCCCCCEEECCCCCCCHHHCCCEEEEEECCCCCEE
KMILEPNVSTSVYKDYETENDTTDGIYPDHGNGTSQPLHFQATLQQDGNIPIESGELKAT
EEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCEEEE
STFQVTYP
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 8096212 [H]