Click here to switch to the map view.

The map label for this gene is 218547515

Identifier: 218547515

GI number: 218547515

Start: 82594

End: 83547

Strand: Direct

Name: 218547515

Synonym: EFER_0076

Alternate gene names: NA

Gene position: 82594-83547 (Clockwise)

Preceding gene: 218547514

Following gene: 218547516

Centisome position: 1.8

GC content: 48.74

Gene sequence:

>954_bases
ATGAAACGTACCCTGATGAGTTGTGCCGTTGCTTCACTGCTGGTTTCAGGTTCCGCGCTGGCTGCATGGCCAGAAAAACC
AATCCAAATCATTGTGCCCTGGGGCGCGGGAGGAAATACCGATACTGTTGCACGCCTGGTGGCAGAAGGGCTGCAAAAAG
AGTTGAAAGTGAATGTCAACGTGGTGAATCGCACGGGAGGTGCTGGGGTGGTTGGCCATGATGCCATTGCGAAAGCTAAA
GCGGATGGCTATACCCTGGGAATTGCGACGGTAGAAATCACCATGATGCACCATCAGGGGATGACGGCGTTAACGTATCA
GAACTACACGCCAATTACACGGCTGGCAGTGAATCTGGGAGGCGTGCAAGTCGCAGCAAATTCGCAGTTCGAAAATATCG
TCCAGATGACCGACTACATCAAGGCGAATCCAGGTAAGTTAAAAGCATCGGGTAGCGGGTTAAATTCCGGCTGGCATCTG
AACTTGATAGGTATGCTCGACAGTATGGGGCTTCCGTCTTCTGCCGTGACCTGGGTGCCTTCTGAAGGTTCCAGTTCTGC
ACTGATGGAACTGGTTTCCGGTGGTATAGATTTTACAACGTCATCACCGGGCGAAGCGAAAAGTATGGTCGATGCCAAAA
TGGTACGTAATTTAGCGACCATGGCAGAAAAATCGGCAGGGCTTTATAAAGATCTTCCAGTATTCCAACAAGCAACTGGC
TATAAATATCATTTGGCGACATGGAATGCCTTAGTGGTTCCGGCGGGTACTCCTGAAGAGGTCTCACAAAAATTAACTGC
CGCTATGCAGGCAGTGTTTGCGCAGGGGAAATTACAAGAATTCGCTACCAAACAAGGGTTTGAAGTTTACCCGCTGTATG
GCAAAGAAATGACGACTTTTATGGCAGATGAAGATGCCAGATACGGAAAATTAATAACCAAAATCAAGGGTTAA

Upstream 100 bases:

>100_bases
AATTGCTGATGCCGCAGATTTCCAGCGTCAACAACTCAAATATTAATATCCGACAGCACTTGCTGTTATTAAAAAATAAT
TAAGACAGGAGTCTATAAAT

Downstream 100 bases:

>100_bases
TCAGACAGGGCGGTGAATATATCGCCGCCCAATTACAGGGATAGCATTATGCGCATAATACCGGTAACGCCGTTATTTCT
GCTGATTTTTGCCATGTTTA

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKRTLMSCAVASLLVSGSALAAWPEKPIQIIVPWGAGGNTDTVARLVAEGLQKELKVNVNVVNRTGGAGVVGHDAIAKAK
ADGYTLGIATVEITMMHHQGMTALTYQNYTPITRLAVNLGGVQVAANSQFENIVQMTDYIKANPGKLKASGSGLNSGWHL
NLIGMLDSMGLPSSAVTWVPSEGSSSALMELVSGGIDFTTSSPGEAKSMVDAKMVRNLATMAEKSAGLYKDLPVFQQATG
YKYHLATWNALVVPAGTPEEVSQKLTAAMQAVFAQGKLQEFATKQGFEVYPLYGKEMTTFMADEDARYGKLITKIKG

Sequences:

>Translated_317_residues
MKRTLMSCAVASLLVSGSALAAWPEKPIQIIVPWGAGGNTDTVARLVAEGLQKELKVNVNVVNRTGGAGVVGHDAIAKAK
ADGYTLGIATVEITMMHHQGMTALTYQNYTPITRLAVNLGGVQVAANSQFENIVQMTDYIKANPGKLKASGSGLNSGWHL
NLIGMLDSMGLPSSAVTWVPSEGSSSALMELVSGGIDFTTSSPGEAKSMVDAKMVRNLATMAEKSAGLYKDLPVFQQATG
YKYHLATWNALVVPAGTPEEVSQKLTAAMQAVFAQGKLQEFATKQGFEVYPLYGKEMTTFMADEDARYGKLITKIKG
>Mature_317_residues
MKRTLMSCAVASLLVSGSALAAWPEKPIQIIVPWGAGGNTDTVARLVAEGLQKELKVNVNVVNRTGGAGVVGHDAIAKAK
ADGYTLGIATVEITMMHHQGMTALTYQNYTPITRLAVNLGGVQVAANSQFENIVQMTDYIKANPGKLKASGSGLNSGWHL
NLIGMLDSMGLPSSAVTWVPSEGSSSALMELVSGGIDFTTSSPGEAKSMVDAKMVRNLATMAEKSAGLYKDLPVFQQATG
YKYHLATWNALVVPAGTPEEVSQKLTAAMQAVFAQGKLQEFATKQGFEVYPLYGKEMTTFMADEDARYGKLITKIKG

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33625; Mature: 33625

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLMSCAVASLLVSGSALAAWPEKPIQIIVPWGAGGNTDTVARLVAEGLQKELKVNVN
CCHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEE
VVNRTGGAGVVGHDAIAKAKADGYTLGIATVEITMMHHQGMTALTYQNYTPITRLAVNLG
EEEECCCCCEECCHHHHHCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCHHHHEEECC
GVQVAANSQFENIVQMTDYIKANPGKLKASGSGLNSGWHLNLIGMLDSMGLPSSAVTWVP
CEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEHHHCCCCCCCCEEEEC
SEGSSSALMELVSGGIDFTTSSPGEAKSMVDAKMVRNLATMAEKSAGLYKDLPVFQQATG
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCC
YKYHLATWNALVVPAGTPEEVSQKLTAAMQAVFAQGKLQEFATKQGFEVYPLYGKEMTTF
CEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE
MADEDARYGKLITKIKG
ECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKRTLMSCAVASLLVSGSALAAWPEKPIQIIVPWGAGGNTDTVARLVAEGLQKELKVNVN
CCHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEE
VVNRTGGAGVVGHDAIAKAKADGYTLGIATVEITMMHHQGMTALTYQNYTPITRLAVNLG
EEEECCCCCEECCHHHHHCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCHHHHEEECC
GVQVAANSQFENIVQMTDYIKANPGKLKASGSGLNSGWHLNLIGMLDSMGLPSSAVTWVP
CEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEHHHCCCCCCCCEEEEC
SEGSSSALMELVSGGIDFTTSSPGEAKSMVDAKMVRNLATMAEKSAGLYKDLPVFQQATG
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCC
YKYHLATWNALVVPAGTPEEVSQKLTAAMQAVFAQGKLQEFATKQGFEVYPLYGKEMTTF
CEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE
MADEDARYGKLITKIKG
ECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]