| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218547498
Identifier: 218547498
GI number: 218547498
Start: 60277
End: 60876
Strand: Reverse
Name: 218547498
Synonym: EFER_0059
Alternate gene names: NA
Gene position: 60876-60277 (Counterclockwise)
Preceding gene: 218547499
Following gene: 218547497
Centisome position: 1.33
GC content: 45.17
Gene sequence:
>600_bases ATGGCTGACTATTTTGAAATACGTGCTGATTACAATCAGCACACCATCACGGTTTATCAGGCTTACAATGATGCAATCGC TGACGTCGCCGTACGTGACGGGCGATTTGGCGCACCTTTTTCATTCAACCGCATGACCTGGATTAAACCCTCTTTTATGT GGATGATGGAGCGTAGCAACTGGGGACTGAAAAAAGATCAACAACGCATTCTCGCAATCCGAATCAAACGCACCTTCTTT GATACATTGCTGGAACAAGCGGTGCTAACCACGCCGGAAGCCCATGTCTATCCACATGCAGGAGTTTGGGAAACGTTATT TGCGCAAGCAAATGTATATGTTCAGTGGGACCCAGAACGCAGCATAAATGGCAAAAAACTGGAGCACCGATCATTACAGC TTGGTATTTCTCGTAACTTGATCAGTCAATTTAACGAAGACGCCATTGTTGCCATTGATGATCTGACGCCGCTGGTGCGA AAGTGTCATAACCTTTTGATAAACGGTAAAACAACACAGGCGAAATCCTTCCTGCCGCCAGAAAAAATTTATCCTGTTAG TGCAGCTGCAAGAAAGGCTTTGGGAATGAAAAATTCCTGA
Upstream 100 bases:
>100_bases GGAAGATAAACAGTATTTTGTCCAGCCGTCGAACCGGCATAAGGATTTGGGTGAGGGAGAGGCGGTCGCGTCTTAACGCT TTACCATTCAGGGAGGAATA
Downstream 100 bases:
>100_bases GACAAATACGCGCCTATTAAGCGGAAAATATCTAAGTGCGACAAATCAACGCCGGGCTTAATACCAGAGAAATTATTCTG GAAATGATTGACGAAGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MADYFEIRADYNQHTITVYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSNWGLKKDQQRILAIRIKRTFF DTLLEQAVLTTPEAHVYPHAGVWETLFAQANVYVQWDPERSINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVR KCHNLLINGKTTQAKSFLPPEKIYPVSAAARKALGMKNS
Sequences:
>Translated_199_residues MADYFEIRADYNQHTITVYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSNWGLKKDQQRILAIRIKRTFF DTLLEQAVLTTPEAHVYPHAGVWETLFAQANVYVQWDPERSINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVR KCHNLLINGKTTQAKSFLPPEKIYPVSAAARKALGMKNS >Mature_198_residues ADYFEIRADYNQHTITVYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSNWGLKKDQQRILAIRIKRTFFD TLLEQAVLTTPEAHVYPHAGVWETLFAQANVYVQWDPERSINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVRK CHNLLINGKTTQAKSFLPPEKIYPVSAAARKALGMKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22893; Mature: 22761
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYFEIRADYNQHTITVYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSN CCCEEEEEECCCCEEEEEEECCCHHHHHHEECCCCCCCCCCCCCEEEECHHEEEEEECCC WGLKKDQQRILAIRIKRTFFDTLLEQAVLTTPEAHVYPHAGVWETLFAQANVYVQWDPER CCCCCHHHEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEEEEECCCC SINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVRKCHNLLINGKTTQAKSFLPP CCCCCEEHHHHEEECHHHHHHHHCCCCEEEEECCHHHHHHHHHHHEECCCCCCHHCCCCH EKIYPVSAAARKALGMKNS HHCCCCHHHHHHHCCCCCC >Mature Secondary Structure ADYFEIRADYNQHTITVYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSN CCEEEEEECCCCEEEEEEECCCHHHHHHEECCCCCCCCCCCCCEEEECHHEEEEEECCC WGLKKDQQRILAIRIKRTFFDTLLEQAVLTTPEAHVYPHAGVWETLFAQANVYVQWDPER CCCCCHHHEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEEEEECCCC SINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVRKCHNLLINGKTTQAKSFLPP CCCCCEEHHHHEEECHHHHHHHHCCCCEEEEECCHHHHHHHHHHHEECCCCCCHHCCCCH EKIYPVSAAARKALGMKNS HHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA