Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 218246583

GI number:

Start: 1836973

End: 1840284

Strand: Reverse

Name: rpoB

Synonym: PCC8801_1751

Alternate gene names: NA

Gene position: NA

Preceding gene: 218246584

Following gene: 218246582

Centisome position: NA

GC content: NA

Gene sequence:

>3312_bases
ATGACTAATCTAACCTATAACTACAATCTGCTTCCCGACTTAATCGAAATTCAACGGTCGAGTTTTCGCTGGTTCCTCGA
AGAAGGACTCATCGAAGAACTCGATAGCTTCTCCCCCATTAGCGACTATACGGGCAAATTAGAACTGCATTTTTTAGGAG
AAAACTATAAATTAAAACAGCCAAAATATGATGTAGACGAAGCAAAACGGCGTGATAGTACCTATTCCGTGCAAATGTAT
GTGCCGACTCGTTTAATTAACAAAGAAACCGGAGAAATTAAAGAACAAGAAGTCTTTATTGGGGATCTACCCCTGATGAC
TGAACGGGGAACCTTTATTATTAATGGTGCCGAACGGGTCATCGTCAATCAAATTGTCCGTTCTCCAGGGGTTTACTACA
AAGCCGAAATCGACAAAAACGGACGGAGAACCTATTCAGCCTCGTTAATTCCCAACCGAGGAGCCTGGTTAAAGTTTGAA
ACCGACAAAAATGGCTTAGTTTGGGTCAGAATCGACAAAACCCGTAAACTATCAGCCCAAGTTTTACTCAAAGCCATTGG
CTTAAGTGATGCCGAAATTCTCGACGGGTTACGTCATCCCGACTTCTATCAGCGTACCCTCGACAAAGAAGGAAATCCCA
GCGAAGAAGAGGCATTATTAGAATTATATCGCAAATTACGCCCCGGAGAACCCCCCACGGTAACAGGAGGACAACAACTC
CTCGATTCGCGCTTTTTTGACAGCAAACGCTACGATCTAGGCCGCGTTGGTCGGTATAAACTCAACAAAAAACTGCGCCT
GAATGCCCCCGATACCATTCGGGTACTACGCCCGGCGGATATTATGGCAGCGATCGACTATTTAATCAACCTAGAATTTG
ATGTAGGTAGTACCGATGATATTGACCACCTAGGAAACCGTCGCGTTCGTTCCGTCGGAGAACTCCTACAAAACCAAGTC
AGAGTCGGCTTAAACCGCCTAGAACGGATAATCCGCGAACGGATGACCGTTAGTGAGTCCGATGGACTAACCCCCGCGTC
TTTGGTTAACCCCAAACCCCTAGTAGCTGCCATTAAAGAGTTTTTTGGCTCATCCCAACTGTCCCAATTCATGGATCAAA
CCAACCCTTTAGCGGAATTGACCCATAAACGGCGGATTTCAGCCCTAGGACCTGGCGGGTTAACGCGAGAACGCGCAGGC
TTTGCGGTGCGAGATATCCATCCCTCCCACCACGGGCGCATCTGTCCGGTAGAAACGCCTGAAGGACCCAACGCAGGATT
AATTGGTTCTTTGGCAACCTATGCACGGGTCAATCAATACGGATTCATCGAAACACCCTACTATAAGGCAGAAAATGGAC
GAGTCAGACGAGATTTAGACCCCGTTTACCTCACCGCCGACGAAGAAGACGATCTGCGGGTCTGTCCGGGGGATGCGGCC
ACTGATGCCGAGGGCAATATCCTAGGGGAAAGCGTCCCCATTCGCTACCGTCAGGAATTTTCCACCACCAGTCCCGAACA
AGTGGACTATGTGGCCGTCTCTCCGGTACAGATTGTTTCGGTAGCTACGTCCATGATTCCCTTTTTGGAACACGACGACG
CTAACCGCGCCCTGATGGGATCGAATATGCAGCGTCAAGCCGTTCCTTTACTGCGGCCAGAACGTCCCTTAGTGGGAACT
GGACTAGAAGCCCAAGCCGCGAGAGATTCAGGGATGGTGATCGTCAGCCGTACCTATGGGATCGTTACCTATGTAGATGC
CTCCGAAATTCGGGTACAGGTGACGGGTCCAGAAAACCACGACAAATTAGGAACCGAGATCACCTATCTGTTACAGAAAT
ATCAACGGTCTAACCAAGATACCTGTTTAAATCAGCGTCCTCTGGTGTACGTTAATGAGGAGGTTGTCCCTGGTCAAGTC
TTAGCCGATGGATCAGCCACCGAAGGCGGAGAATTAGCCCTAGGACAGAATATTCTCGTCGCCTATATGCCCTGGGAAGG
CTATAACTACGAGGATGCGATCCTGATTAGTGAACGGTTGGTCTATGACGACGTTTACACCAGTATTCACGTTGAAAAGT
ACGAAATTGAAGCCCGTCAGACTAAATTAGGACCAGAAGAGATTACCCGCGAAATTCCTAACGTTGGGGAAGATTCCCTG
AGAAACCTCGATGAACAGGGCATTATCCGCATTGGGGCTTGGACAGAAGCCGGGGATATCCTGGTCGGAAAAGTGACCCC
CAAAGGAGAATCGGATCAACCCCCTGAAGAAAAGCTATTACGCGCAATTTTTGGTGAAAAAGCCCGTGATGTACGGGATA
ACTCTTTAAGGGTTCCCAACGGAGAAAAAGGCCGCGTCGTCGATGTCCGGGTGTTTACGCGGGAACAGGGAGATGAATTA
CCCCCTGGGGCTAACATGGTAGTACGGGTGTATGTTGCCCAAAAACGCAAAATCCAAGTCGGGGATAAAATGGCCGGTCG
CCACGGGAATAAGGGGATTATTTCCCGTATTTTGCCCATTGAAGATATGCCCTATTTACCTGATGGCCGCCCCGTGGATA
TCGTTCTCAACCCCTTGGGTGTGCCCTCGCGGATGAACGTCGGTCAGGTGTTTGAATGCTTATTAGGATGGGCAGGTGAA
AACTTGGGCGTTCGCTTTAAAGTGACTCCCTTTGATGAAATGTACGGCGAAGAAACCTCTCGTAAAACCGTTCATGGCAA
ACTGCAAGAAGCCAGTCACAAACGCGGGAAAAGCTGGATTTATCAAGAAGAAAATCCAGGGAAGATTCAGGTCTTTGATG
GCCGTACTGGAGAACCCTTCGATCGCCCCGTCACCGTAGGTCAAGCCTATATGCTTAAATTAGTCCACTTGGTGGATGAT
AAGATCCACGCCCGTTCGACGGGTCCCTACTCCTTGGTAACACAACAACCTTTAGGTGGAAAGGCACAACAAGGTGGACA
ACGCTTCGGAGAAATGGAAGTTTGGGCGTTAGAAGCCTATGGGGCAGCCTATACCCTGCAAGAGTTGTTAACGGTGAAAT
CCGACGATATGCAAGGACGGAACGAAGCCTTAAATGCGATCGTTAAGGGTAAACCCATTCCTCAACCCGGAACGCCTGAG
TCCTTTAAGGTACTGATGCGCGAATTGCAGTCCTTGGGCTTAGATATTGCCGTCCATAAGGTAGAAAATGCCGAAGATGG
GACCAGTCGGGATGTGGAGGTTGATTTGATGGTGGATACCCAACGTCGTACTCCCAGTCGTCCTACTTATGAGTCCTTAA
CTAGCGAGGATCTCGAAGAAGAAGAAGTGTAA

Upstream 100 bases:

>100_bases
TTAGCTCAACAAACGACAGAAAATGCCTGTCAATTATTCCAATTATCAATTTCTAATTGATAACGGCTTCTTAGATCATT
AATAGATAGATTTACCCCGA

Downstream 100 bases:

>100_bases
TGAGTGAATAGTTAATAGTTAATAGTGAATGGTTAGTCATGAAGAACTATCAACTATTAACTAATAACTATCAACTAATA
ACTACCAACTATCAACTAAT

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1103_residues
MTNLTYNYNLLPDLIEIQRSSFRWFLEEGLIEELDSFSPISDYTGKLELHFLGENYKLKQPKYDVDEAKRRDSTYSVQMY
VPTRLINKETGEIKEQEVFIGDLPLMTERGTFIINGAERVIVNQIVRSPGVYYKAEIDKNGRRTYSASLIPNRGAWLKFE
TDKNGLVWVRIDKTRKLSAQVLLKAIGLSDAEILDGLRHPDFYQRTLDKEGNPSEEEALLELYRKLRPGEPPTVTGGQQL
LDSRFFDSKRYDLGRVGRYKLNKKLRLNAPDTIRVLRPADIMAAIDYLINLEFDVGSTDDIDHLGNRRVRSVGELLQNQV
RVGLNRLERIIRERMTVSESDGLTPASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAG
FAVRDIHPSHHGRICPVETPEGPNAGLIGSLATYARVNQYGFIETPYYKAENGRVRRDLDPVYLTADEEDDLRVCPGDAA
TDAEGNILGESVPIRYRQEFSTTSPEQVDYVAVSPVQIVSVATSMIPFLEHDDANRALMGSNMQRQAVPLLRPERPLVGT
GLEAQAARDSGMVIVSRTYGIVTYVDASEIRVQVTGPENHDKLGTEITYLLQKYQRSNQDTCLNQRPLVYVNEEVVPGQV
LADGSATEGGELALGQNILVAYMPWEGYNYEDAILISERLVYDDVYTSIHVEKYEIEARQTKLGPEEITREIPNVGEDSL
RNLDEQGIIRIGAWTEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVDVRVFTREQGDEL
PPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPIEDMPYLPDGRPVDIVLNPLGVPSRMNVGQVFECLLGWAGE
NLGVRFKVTPFDEMYGEETSRKTVHGKLQEASHKRGKSWIYQEENPGKIQVFDGRTGEPFDRPVTVGQAYMLKLVHLVDD
KIHARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPQPGTPE
SFKVLMRELQSLGLDIAVHKVENAEDGTSRDVEVDLMVDTQRRTPSRPTYESLTSEDLEEEEV

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA