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The map label for this gene is ydhB [H]

Identifier: 218236098

GI number: 218236098

Start: 3691640

End: 3692395

Strand: Reverse

Name: ydhB [H]

Synonym: BCB4264_A3781

Alternate gene names: 218236098

Gene position: 3692395-3691640 (Counterclockwise)

Preceding gene: 218235381

Following gene: 218234638

Centisome position: 68.14

GC content: 36.24

Gene sequence:

>756_bases
GTGGCAATTATTATAACAATGTTAGTAATGGGTATTTTATTAGGATTTGTTGGAGCTGGAGGAGCTGGGTTTATTATCGC
GATACTCACTTTAGTATTTCATATTCCTATTCATGTTGCTCTTGCAACATCTTTAACTGCAATGGCGTTTACGACATTAT
CAGGTGTTGTCAGTCATTACCGTGAAGGTAATGTAGCACTTATTATAGGCGGGATTGTTGGGGGATTTGGCGCAATTGGC
TCTTATATTGGTTCTAAATTTGGTTCACTGATACCAGCACATCTTCTTCATTGGTTTACAGCTGGGATGTTATTTTTATC
GGCGATTTTTATGTTTATTAAATTAATTATGTTCCAAAACAAAGAACAGTCATCTTTATATAAGCATAAAAAGTTTTCCA
TGAACTACTTGTTGAAATGTATATACCTTGGATTAGTTACTGGAATGATGGCTGGTTCATTTGGGATTGGTTCGGCACCG
TTTATTCAGCTTGGATTAATGGTTCTATTGGGATTAACGATTCAGCAATCTGTAGGGACAACAATGCTTGTTATATTACC
GATTGCAATTGGAGGCGGTCTAGGATATAGTTCGGAAGGATATTTAGATTATATATTGTTATTGCAAGTATTAATTGGGA
CCATGTTAGGTGCATATATTGGCGCGAAGTTTACAAATTATGCACCGCGAATGCTTTTGAGGTTTTCGATGATTATGACA
CCGGTTTTAGCTGGATGTATGCTATTGATGGAATAA

Upstream 100 bases:

>100_bases
AAGTACATATCATTGAAATAAAAAGCATCCATCTAGGATGCTTTTTATTTGTATGTAAGGATAAATATGATGGATAATTG
TGTTACTGGAGGGAAAGTCT

Downstream 100 bases:

>100_bases
GGTGAAATTATAATAAGTAGGGGGTTACTGCTTACAAATAGCGGGATAAAATTAATATAGCAAACTATTAATATATTTTA
CGAATGAATTATGTAGGTAA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MAIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIG
SYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCIYLGLVTGMMAGSFGIGSAP
FIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLRFSMIMT
PVLAGCMLLME

Sequences:

>Translated_251_residues
MAIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIG
SYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCIYLGLVTGMMAGSFGIGSAP
FIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLRFSMIMT
PVLAGCMLLME
>Mature_250_residues
AIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGS
YIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCIYLGLVTGMMAGSFGIGSAPF
IQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLRFSMIMTP
VLAGCMLLME

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26768; Mature: 26637

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCC
>Mature Secondary Structure 
AIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVVSHY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQN
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEQSSLYKHKKFSMNYLLKCIYLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCH
TMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLRFSMIMT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLAGCMLLME
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]