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The map label for this gene is yjbJ [H]

Identifier: 218236072

GI number: 218236072

Start: 1643301

End: 1644086

Strand: Direct

Name: yjbJ [H]

Synonym: BCB4264_A1727

Alternate gene names: 218236072

Gene position: 1643301-1644086 (Clockwise)

Preceding gene: 218233744

Following gene: 218235179

Centisome position: 30.32

GC content: 38.55

Gene sequence:

>786_bases
ATGAAAGTTGGAAATATAGTAAAAGAAGTGCTTGCATATAAAAAAGGACAAATTCAGCAAAAGCTAAGTAGTCCACAAGC
ATTTGTTAGTAGTCGTTTTCAAGAGAAATTGCAGAGTGAACCTGCGAAGGAGACGAAGGCTACTACGCAGCCGGCAAAAA
TAGAAGATATGAGTCAGCCGGTACAATCTACGAAAATAGAAACGGTTGTTAATAAACCGGCAGAAACTATTAATAAAGTA
GAGGAAGCGAGTAAGCCTGAAGAAAAGGCTGAAACGAAGAAAGCAGATGAAGTGCAAGTTGCGCAAAAAGAGTTTGAACG
ACGTTTCCCAGAAACGAAAAATGAGGCCGCTGATACGTGGGAATTAACGAAGAAGTATAATATTCAAAAAATACGTTCTT
CCAATGAAGGGAAGTATGAGGATATTATTGATCGAGTAAGTCGTACATATGGAATTCCGAAAACGTTAATTCAAAAAATG
ATTGAAGTAGAGTCTAATTTTAATCCGAAAACGGTGTCACATGCCGGTGCGATGGGTCTTATGCAGCTTATGCCAGCGAA
TGTGAAGGAGATGGGTGTGAAGAATCCCTTTTCACCAGCTGAAAGTATTGAAGGTGGCGTGAAAGAGTTAAGCGGTTATT
TAAAGAAAAATAACGGCGACTTAGTATTGGCGCTTGCTTCTTATAATGCTGGTCCTGGTAATGTGAGAAAGTACGGAGGC
GTACCGCCATTTAAAGAAACGCAAGGATATATTAAAAAAATATTAAATATCGACGTTTCAAAATAA

Upstream 100 bases:

>100_bases
ATATTCATTTTTTTATTACATAATTATTAAAAGGATTATTGCAAACTTTAAAAAAAAACTCTAATATTAGATTATCTTTG
TTTACCGAAAAGGTGATATT

Downstream 100 bases:

>100_bases
GAAGTTTCATATATAGAGAGAACATGAAATTTTCGTGAACATGATATGGGAGTTGGCTAGATTTGAAATTACAAGATGAT
ATTCCGTTAACAATTTATTT

Product: transglycosylase, SLT family

Products: 1,6-Anhydrobond [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKVGNIVKEVLAYKKGQIQQKLSSPQAFVSSRFQEKLQSEPAKETKATTQPAKIEDMSQPVQSTKIETVVNKPAETINKV
EEASKPEEKAETKKADEVQVAQKEFERRFPETKNEAADTWELTKKYNIQKIRSSNEGKYEDIIDRVSRTYGIPKTLIQKM
IEVESNFNPKTVSHAGAMGLMQLMPANVKEMGVKNPFSPAESIEGGVKELSGYLKKNNGDLVLALASYNAGPGNVRKYGG
VPPFKETQGYIKKILNIDVSK

Sequences:

>Translated_261_residues
MKVGNIVKEVLAYKKGQIQQKLSSPQAFVSSRFQEKLQSEPAKETKATTQPAKIEDMSQPVQSTKIETVVNKPAETINKV
EEASKPEEKAETKKADEVQVAQKEFERRFPETKNEAADTWELTKKYNIQKIRSSNEGKYEDIIDRVSRTYGIPKTLIQKM
IEVESNFNPKTVSHAGAMGLMQLMPANVKEMGVKNPFSPAESIEGGVKELSGYLKKNNGDLVLALASYNAGPGNVRKYGG
VPPFKETQGYIKKILNIDVSK
>Mature_261_residues
MKVGNIVKEVLAYKKGQIQQKLSSPQAFVSSRFQEKLQSEPAKETKATTQPAKIEDMSQPVQSTKIETVVNKPAETINKV
EEASKPEEKAETKKADEVQVAQKEFERRFPETKNEAADTWELTKKYNIQKIRSSNEGKYEDIIDRVSRTYGIPKTLIQKM
IEVESNFNPKTVSHAGAMGLMQLMPANVKEMGVKNPFSPAESIEGGVKELSGYLKKNNGDLVLALASYNAGPGNVRKYGG
VPPFKETQGYIKKILNIDVSK

Specific function: Murein-Degrading Enzyme. Catalyzes The Cleavage Of The Glycosidic Bonds Between N-Acetylmuramic Acid And N- Acetylglucosamine Residues In Peptidoglycan. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division. [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Periplasmic Protein. Tightly Associated With The Murein Sacculus [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082441, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 29068; Mature: 29068

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGNIVKEVLAYKKGQIQQKLSSPQAFVSSRFQEKLQSEPAKETKATTQPAKIEDMSQP
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHH
VQSTKIETVVNKPAETINKVEEASKPEEKAETKKADEVQVAQKEFERRFPETKNEAADTW
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ELTKKYNIQKIRSSNEGKYEDIIDRVSRTYGIPKTLIQKMIEVESNFNPKTVSHAGAMGL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MQLMPANVKEMGVKNPFSPAESIEGGVKELSGYLKKNNGDLVLALASYNAGPGNVRKYGG
HHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
VPPFKETQGYIKKILNIDVSK
CCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVGNIVKEVLAYKKGQIQQKLSSPQAFVSSRFQEKLQSEPAKETKATTQPAKIEDMSQP
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHH
VQSTKIETVVNKPAETINKVEEASKPEEKAETKKADEVQVAQKEFERRFPETKNEAADTW
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ELTKKYNIQKIRSSNEGKYEDIIDRVSRTYGIPKTLIQKMIEVESNFNPKTVSHAGAMGL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MQLMPANVKEMGVKNPFSPAESIEGGVKELSGYLKKNNGDLVLALASYNAGPGNVRKYGG
HHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
VPPFKETQGYIKKILNIDVSK
CCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]