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The map label for this gene is bscR [H]

Identifier: 218236018

GI number: 218236018

Start: 2825900

End: 2826466

Strand: Reverse

Name: bscR [H]

Synonym: BCB4264_A2954

Alternate gene names: 218236018

Gene position: 2826466-2825900 (Counterclockwise)

Preceding gene: 218235397

Following gene: 218231239

Centisome position: 52.16

GC content: 32.63

Gene sequence:

>567_bases
ATGGCTAAAAACAAACAAGAGGATATTTTTGATGCTGCGATGCAACTTTTTGCAGAGCGTGGTTACGATGGTACGACAAT
TCCAATGATCGCTGAAAAGGCAAAAGTCGGTGCGGGTACTATTTATCGCTATTTTGAAAATAAAGAGGCACTTGTTAACT
CATTATTTTCAAAAAGTATGTTAGAGCTTTCTGAAATAATAAAAACGGATTTTCCTGTTGAAGCAAATATTCGTGAACAG
TTTAGTCATACGTACAACCGTTTATTTGAATTTGCGAGAAACAATGTAGATGCTTTTTTATTTACAAATTCTCACTGTGA
TAGTTATTTTCTTGATGAACAGAGTAAGAAAATATTTGATGATTTTATAGGCTTCTTTATGAATATTATTGAAGATGGAA
TCGCAAAAGGTTTTCTTCGTCCATTGCCTCCAGTTGCTTTAATTATTATTGTATATCAACCGCTAGAAAAATTAACGAAA
GTAATTGCAACAGGGCAATTAGAATACTCGAAAGAGTTAGTAAAAGAATTAGAAGAAAGCTCTTGGAACGCTATTAGAAT
CATTTGA

Upstream 100 bases:

>100_bases
GAATCGCAACTATACGTTGTCACGCACTTGACTTTTATTCCCTGTAATTTATAATTAAAAACGGAATGAATTTTCATTCC
TGAAAATAGAGGTGGAAAAA

Downstream 100 bases:

>100_bases
TTCTATAGCTTTATAAGGACAGGAATGAATATTCATTCCTAAATAGATTTAAAAAAATGAGAGTAGGAAAGGATATTTGT
GTAACTAAGGGAATGAACAT

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSMLELSEIIKTDFPVEANIREQ
FSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFDDFIGFFMNIIEDGIAKGFLRPLPPVALIIIVYQPLEKLTK
VIATGQLEYSKELVKELEESSWNAIRII

Sequences:

>Translated_188_residues
MAKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSMLELSEIIKTDFPVEANIREQ
FSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFDDFIGFFMNIIEDGIAKGFLRPLPPVALIIIVYQPLEKLTK
VIATGQLEYSKELVKELEESSWNAIRII
>Mature_187_residues
AKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSMLELSEIIKTDFPVEANIREQF
SHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFDDFIGFFMNIIEDGIAKGFLRPLPPVALIIIVYQPLEKLTKV
IATGQLEYSKELVKELEESSWNAIRII

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21633; Mature: 21502

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSM
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH
LELSEIIKTDFPVEANIREQFSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
DFIGFFMNIIEDGIAKGFLRPLPPVALIIIVYQPLEKLTKVIATGQLEYSKELVKELEES
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SWNAIRII
CCCEEEEC
>Mature Secondary Structure 
AKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSM
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH
LELSEIIKTDFPVEANIREQFSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
DFIGFFMNIIEDGIAKGFLRPLPPVALIIIVYQPLEKLTKVIATGQLEYSKELVKELEES
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SWNAIRII
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]