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The map label for this gene is ylbO [H]

Identifier: 218235991

GI number: 218235991

Start: 3948171

End: 3948677

Strand: Reverse

Name: ylbO [H]

Synonym: BCB4264_A4023

Alternate gene names: 218235991

Gene position: 3948677-3948171 (Counterclockwise)

Preceding gene: 218234388

Following gene: 218235016

Centisome position: 72.87

GC content: 36.88

Gene sequence:

>507_bases
ATGGCGACAACAAGACAAGATGCTTGGACTGATGATGAAGATTTGCTTCTGGCAGAAGTAGTACTCCGGCATATTCGAGA
AGGTGGAACACAACTTTCTGCCTTTAAGGAAGTGGGGAAAAATTTATCTCGTACACCAGCAGCATGTGGGTTTAGATGGA
ATTCTTACGTAAGAAAGCAATATAAAGAACGTATTGAGGAAGCAAAGCAACTTCGTAAAGTAGAACATTATGAAGTGAAA
GAGGCAAAGGTGTTAGAACCTACGTCAATTACGTTGAATGATGTTATTGATTTCTTGCAAAATTATAAAGATGAAAACTC
TTTAACGGTGTTGCAACAACAAGTTGAATCATTACAAACAGAAAGAGAGCGTCTTCTGGAGCGATTATCAGTATATGAAG
AAGAGTATAGAACATTACTTGATTATATCGATCAAAAAAGAAGTGTAATGGTAGCGGAAAGAAACAATGCTCGCTCGAAT
GAGAAGTTAGAGAAGCTTAAGAAATAA

Upstream 100 bases:

>100_bases
TCTGCGTTTATTTTTTTTGCCTTAATCTTTAGTTGTTGTATTCTATCTTTTCTAGTAACTGCATATGCTTAATAAAAAAT
GCATAGGGAGGACTAGAGAG

Downstream 100 bases:

>100_bases
AAAACAGCTGTTATACAGCTGTTTTTTTATTTCTTAAGCGGATTCTTCGTTTGTAACCGCATTCAAATTTGTTTCTGGAT
GCCAAATATAAAAATCACCA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGKNLSRTPAACGFRWNSYVRKQYKERIEEAKQLRKVEHYEVK
EAKVLEPTSITLNDVIDFLQNYKDENSLTVLQQQVESLQTERERLLERLSVYEEEYRTLLDYIDQKRSVMVAERNNARSN
EKLEKLKK

Sequences:

>Translated_168_residues
MATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGKNLSRTPAACGFRWNSYVRKQYKERIEEAKQLRKVEHYEVK
EAKVLEPTSITLNDVIDFLQNYKDENSLTVLQQQVESLQTERERLLERLSVYEEEYRTLLDYIDQKRSVMVAERNNARSN
EKLEKLKK
>Mature_167_residues
ATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGKNLSRTPAACGFRWNSYVRKQYKERIEEAKQLRKVEHYEVKE
AKVLEPTSITLNDVIDFLQNYKDENSLTVLQQQVESLQTERERLLERLSVYEEEYRTLLDYIDQKRSVMVAERNNARSNE
KLEKLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH myb-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014243
- InterPro:   IPR012287
- InterPro:   IPR017930
- InterPro:   IPR001005 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19868; Mature: 19736

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00037 MYB_1 ; PS50090 MYB_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGKNLSRTPAACGFRWNSYVRKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH
YKERIEEAKQLRKVEHYEVKEAKVLEPTSITLNDVIDFLQNYKDENSLTVLQQQVESLQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ERERLLERLSVYEEEYRTLLDYIDQKRSVMVAERNNARSNEKLEKLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure 
ATTRQDAWTDDEDLLLAEVVLRHIREGGTQLSAFKEVGKNLSRTPAACGFRWNSYVRKQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH
YKERIEEAKQLRKVEHYEVKEAKVLEPTSITLNDVIDFLQNYKDENSLTVLQQQVESLQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ERERLLERLSVYEEEYRTLLDYIDQKRSVMVAERNNARSNEKLEKLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]