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The map label for this gene is ybgL [C]

Identifier: 218235847

GI number: 218235847

Start: 2958936

End: 2959697

Strand: Reverse

Name: ybgL [C]

Synonym: BCB4264_A3086

Alternate gene names: 218235847

Gene position: 2959697-2958936 (Counterclockwise)

Preceding gene: 218235693

Following gene: 218231499

Centisome position: 54.62

GC content: 38.85

Gene sequence:

>762_bases
GTGAAGACAATCGATTTAAACTGTGATTCAGGAGAAAGTTTTGGCGCTTATAAAATGGGGAATGATGATGAAATTCTTCC
ATTCGTATCCTCTATAAATGTTGCTTGTGGTTTTCATGCAGGTGATCCGTCTGTTATGCGGCAAACGATTGAAAAGGCAA
TGCAACATAACGTAGCAATAGGGGCACACCCCGGATTTCCAGATTTAATTGGATTCGGTAGAAGGAACATGAATGTTTCA
GCAAGTGAAGTATACGATTATGTTTTATATCAAATTGGTGCATTAGACGGTTTTGTAAAAGTGGCTGGCGGGAAGATGCA
TCATGTGAAACCGCACGGAGCTCTATATAATATGGCGGCAACTAATCCGGAAATTGCAGATGCAATTGCAAAGGCAATTT
ATCATATAAATCCAAGTCTATTACTTTACGGATTAGCAAATAGCGAGGCGTTTATACAGGCTGCGGTAAAATACAATATA
ACTCTCGTACAAGAAGCTTTTGCAGATCGTACGTATAAGCAAGATGGAACATTAACGAGTCGTACGGAAGAAAATGCGCT
TATAAAAAATGAAGAAGAAGCGATAAAGCAAGTGCTTCAAATGGTGAAAGAAGGCTATGTAAGTGCGGTGAACGGAGAGA
AAGTAGCAGTTCAAGCGCAAACGATTTGTTTACACGGTGATGGAGAAAAAGCATTACAATTTGCGAAAAGAATATACAGA
ACATTCGAACATGATGGTATTTCTATTTGTGCACCGAAATAA

Upstream 100 bases:

>100_bases
GCTTGAAGAAGCGGAACAATTGTACATAGAACAAGAAGTAAATAGGAATCTATTAAAGAAATTCATTGCTTTACGAAGCT
GAAATTAGGAGGGAAATAAT

Downstream 100 bases:

>100_bases
AAAAATGTGGGGAAGTGTTGGAATTGGTGAAATTAATCGGGATATTACTAGTTGCAGTGGGCTTTTTATTTAGATTAAAT
ACACTGTTAGTCGTTATGGT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKTIDLNCDSGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTIEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ASEVYDYVLYQIGALDGFVKVAGGKMHHVKPHGALYNMAATNPEIADAIAKAIYHINPSLLLYGLANSEAFIQAAVKYNI
TLVQEAFADRTYKQDGTLTSRTEENALIKNEEEAIKQVLQMVKEGYVSAVNGEKVAVQAQTICLHGDGEKALQFAKRIYR
TFEHDGISICAPK

Sequences:

>Translated_253_residues
MKTIDLNCDSGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTIEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ASEVYDYVLYQIGALDGFVKVAGGKMHHVKPHGALYNMAATNPEIADAIAKAIYHINPSLLLYGLANSEAFIQAAVKYNI
TLVQEAFADRTYKQDGTLTSRTEENALIKNEEEAIKQVLQMVKEGYVSAVNGEKVAVQAQTICLHGDGEKALQFAKRIYR
TFEHDGISICAPK
>Mature_253_residues
MKTIDLNCDSGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTIEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ASEVYDYVLYQIGALDGFVKVAGGKMHHVKPHGALYNMAATNPEIADAIAKAIYHINPSLLLYGLANSEAFIQAAVKYNI
TLVQEAFADRTYKQDGTLTSRTEENALIKNEEEAIKQVLQMVKEGYVSAVNGEKVAVQAQTICLHGDGEKALQFAKRIYR
TFEHDGISICAPK

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=50.4032258064516, Blast_Score=256, Evalue=8e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3086_BACC4 (B7H8H6)

Other databases:

- EMBL:   CP001176
- RefSeq:   YP_002367793.1
- ProteinModelPortal:   B7H8H6
- EnsemblBacteria:   EBBACT00000108541
- GeneID:   7100455
- GenomeReviews:   CP001176_GR
- KEGG:   bcb:BCB4264_A3086
- GeneTree:   EBGT00050000001139
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27603; Mature: 27603

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIDLNCDSGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTIEKAMQHNVAI
CCEEECCCCCCCCCCCEECCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFPDLIGFGRRNMNVSASEVYDYVLYQIGALDGFVKVAGGKMHHVKPHGALYNMAA
ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEECC
TNPEIADAIAKAIYHINPSLLLYGLANSEAFIQAAVKYNITLVQEAFADRTYKQDGTLTS
CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RTEENALIKNEEEAIKQVLQMVKEGYVSAVNGEKVAVQAQTICLHGDGEKALQFAKRIYR
CCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHH
TFEHDGISICAPK
HHCCCCEEEECCC
>Mature Secondary Structure
MKTIDLNCDSGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTIEKAMQHNVAI
CCEEECCCCCCCCCCCEECCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFPDLIGFGRRNMNVSASEVYDYVLYQIGALDGFVKVAGGKMHHVKPHGALYNMAA
ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEECC
TNPEIADAIAKAIYHINPSLLLYGLANSEAFIQAAVKYNITLVQEAFADRTYKQDGTLTS
CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RTEENALIKNEEEAIKQVLQMVKEGYVSAVNGEKVAVQAQTICLHGDGEKALQFAKRIYR
CCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHH
TFEHDGISICAPK
HHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA