Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 218235808

GI number: 218235808

Start: 1646074

End: 1646832

Strand: Direct

Name: fliP [H]

Synonym: BCB4264_A1732

Alternate gene names: 218235808

Gene position: 1646074-1646832 (Clockwise)

Preceding gene: 218232378

Following gene: 218233470

Centisome position: 30.38

GC content: 35.05

Gene sequence:

>759_bases
ATGAGAATAAAGAAACAGTTATCATTATTAGCCGTTATTTTCGTATTTTCTATCGTTTTTTCAATTATTTTTGTAAATCC
AGCGTATGCGGCCCCGAACGGTTTTATTAATTTCGAAAATGGAAAAGAGTTTACGAGTAATTCAAGTGTACAACTATTTG
CGCTCGTTACCCTTTTATCATTATCTTCTTCTATCGTTCTATTATTTACACATTTTACTTATTTTATGATCGTTCTTGGG
ATTACACGTCAAGGACTTGGGGTAATGAATTTACCACCAAACCAAGTGCTTGTTGGACTTGCATTATTTTTATCACTCTT
TACGATGCAGCCTGTACTCGGGCAACTGAAGAGCGATGTGTGGGATCCGATGACGAAAGAGAAAATAACAGTAAGCCAAG
CTGCGGAAACGACAGCTCCTATTATGAAAGAATATATGTCAAAGCATACGTATAAGCATGATTTGAAAATGATGCTGAAA
GTACGCGGAGAAGAGTTGCCGAAAGATTTGAAAGATCTTTCCTTATTTACACTTGTACCATCCTTTACGTTAACGCAAAT
TCAAAAAGGTTTACTAACAGGGATGTTCATTTATTTAGCGTTTGTATTTATAGATTTGATTATTAGTACACTTTTAATGT
ACCTCGGGATGATGATGGTACCGCCGATGATTTTAAGTTTACCGTTTAAAATACTCGTTTTCGTATATTTAGGTGGATAT
ACAAAAATTGTCGATATTATGTTTAAGACGGTCGCCTGA

Upstream 100 bases:

>100_bases
ACGGTGTGCAGTCTGTGCAATTAACCGGAACAGGAAATCAGTTTCAACAAGCACTAGAAGACGCGGTGAAGACTGAAACG
AAAAAAGTAGAGGATCCATT

Downstream 100 bases:

>100_bases
AGCGTTTGATGCTATGTGATAGGAGTCATATAAATGAATACGTCACCAATTATAGATATTTTCCAAACCTTTTTTTATAA
AGGGGTTATGATTTTAATGC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRIKKQLSLLAVIFVFSIVFSIIFVNPAYAAPNGFINFENGKEFTSNSSVQLFALVTLLSLSSSIVLLFTHFTYFMIVLG
ITRQGLGVMNLPPNQVLVGLALFLSLFTMQPVLGQLKSDVWDPMTKEKITVSQAAETTAPIMKEYMSKHTYKHDLKMMLK
VRGEELPKDLKDLSLFTLVPSFTLTQIQKGLLTGMFIYLAFVFIDLIISTLLMYLGMMMVPPMILSLPFKILVFVYLGGY
TKIVDIMFKTVA

Sequences:

>Translated_252_residues
MRIKKQLSLLAVIFVFSIVFSIIFVNPAYAAPNGFINFENGKEFTSNSSVQLFALVTLLSLSSSIVLLFTHFTYFMIVLG
ITRQGLGVMNLPPNQVLVGLALFLSLFTMQPVLGQLKSDVWDPMTKEKITVSQAAETTAPIMKEYMSKHTYKHDLKMMLK
VRGEELPKDLKDLSLFTLVPSFTLTQIQKGLLTGMFIYLAFVFIDLIISTLLMYLGMMMVPPMILSLPFKILVFVYLGGY
TKIVDIMFKTVA
>Mature_252_residues
MRIKKQLSLLAVIFVFSIVFSIIFVNPAYAAPNGFINFENGKEFTSNSSVQLFALVTLLSLSSSIVLLFTHFTYFMIVLG
ITRQGLGVMNLPPNQVLVGLALFLSLFTMQPVLGQLKSDVWDPMTKEKITVSQAAETTAPIMKEYMSKHTYKHDLKMMLK
VRGEELPKDLKDLSLFTLVPSFTLTQIQKGLLTGMFIYLAFVFIDLIISTLLMYLGMMMVPPMILSLPFKILVFVYLGGY
TKIVDIMFKTVA

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=195, Percent_Identity=36.4102564102564, Blast_Score=140, Evalue=6e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28354; Mature: 28354

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]