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The map label for this gene is 218235785

Identifier: 218235785

GI number: 218235785

Start: 2794521

End: 2795030

Strand: Reverse

Name: 218235785

Synonym: BCB4264_A2919

Alternate gene names: NA

Gene position: 2795030-2794521 (Counterclockwise)

Preceding gene: 218233492

Following gene: 218231938

Centisome position: 51.58

GC content: 32.55

Gene sequence:

>510_bases
ATGCGTACAATTTTACTTTTTCTAAACAACATGTCCATCGATAAAATAGAGAACATTAGACATAAACATGATCCTTTAGT
TGGATTAATTCCACCGCATATAACAATCGTATTCCCATTTGAAAGTTCGATTTCAAATGATGAGCTGAAATTACATATTA
TAAATGTATCAAAACCGATACAGAATATAGAAATTGAATTTACGAATCAAATTACAAGTGAAAGAGAATATTTGTTTTTA
CGAGTTGAAAAGGGGAAAGAACAAATAGAGGAACTACATAATATTCTATATACAGGACCTTTATTACAATTTTTGGAAGA
AGACATTCCGTACATCCCGCATGTAACAGTCGGAAGAAAAGAAAGTGCCGAATTAGCTGCTGAAGTAGTGAAGGAGATTC
CTAGTTTTCATGGGAAGTTAAATTGTTTGATTGATAGAATAAGCGTGGAGCGAATTGGAGAGAACGGGGAATCAATTATT
GAATTTGAAGTGCCATTTCTAAAAAGCTGA

Upstream 100 bases:

>100_bases
AGTTTTTTTATTTTTATAGGTAAGCAAAACAAGTTGTTGAAGGGCAGGCTATCATAGAATATGATACATATTATAATGAG
GAAAAGTTGAGGGGATAAAA

Downstream 100 bases:

>100_bases
CAAAAGTCAGCTTTTTATTTCGTAGCATGAAGTAATGCACCAATTGCACCGCTATTACCACCATCTTGTAAAAAGATTGG
TGTTTTATTTTGATATTCGG

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRTILLFLNNMSIDKIENIRHKHDPLVGLIPPHITIVFPFESSISNDELKLHIINVSKPIQNIEIEFTNQITSEREYLFL
RVEKGKEQIEELHNILYTGPLLQFLEEDIPYIPHVTVGRKESAELAAEVVKEIPSFHGKLNCLIDRISVERIGENGESII
EFEVPFLKS

Sequences:

>Translated_169_residues
MRTILLFLNNMSIDKIENIRHKHDPLVGLIPPHITIVFPFESSISNDELKLHIINVSKPIQNIEIEFTNQITSEREYLFL
RVEKGKEQIEELHNILYTGPLLQFLEEDIPYIPHVTVGRKESAELAAEVVKEIPSFHGKLNCLIDRISVERIGENGESII
EFEVPFLKS
>Mature_169_residues
MRTILLFLNNMSIDKIENIRHKHDPLVGLIPPHITIVFPFESSISNDELKLHIINVSKPIQNIEIEFTNQITSEREYLFL
RVEKGKEQIEELHNILYTGPLLQFLEEDIPYIPHVTVGRKESAELAAEVVKEIPSFHGKLNCLIDRISVERIGENGESII
EFEVPFLKS

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19495; Mature: 19495

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILLFLNNMSIDKIENIRHKHDPLVGLIPPHITIVFPFESSISNDELKLHIINVSKPI
CEEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCC
QNIEIEFTNQITSEREYLFLRVEKGKEQIEELHNILYTGPLLQFLEEDIPYIPHVTVGRK
CEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCC
ESAELAAEVVKEIPSFHGKLNCLIDRISVERIGENGESIIEFEVPFLKS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRTILLFLNNMSIDKIENIRHKHDPLVGLIPPHITIVFPFESSISNDELKLHIINVSKPI
CEEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCC
QNIEIEFTNQITSEREYLFLRVEKGKEQIEELHNILYTGPLLQFLEEDIPYIPHVTVGRK
CEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCC
ESAELAAEVVKEIPSFHGKLNCLIDRISVERIGENGESIIEFEVPFLKS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA