Click here to switch to the map view.

The map label for this gene is nagJ [H]

Identifier: 218235736

GI number: 218235736

Start: 1792128

End: 1793903

Strand: Reverse

Name: nagJ [H]

Synonym: BCB4264_A1885

Alternate gene names: 218235736

Gene position: 1793903-1792128 (Counterclockwise)

Preceding gene: 218235900

Following gene: 218232554

Centisome position: 33.1

GC content: 36.66

Gene sequence:

>1776_bases
ATGAACAGAAGAAAGAATTGTAGATTACAAAAAACTATAAAGGTGTTTGCAACATCTGCTATTTTAGCAACCACGTTATT
TACACCTATTATGTCAAACAATTTAGATGTACATGCTGAAACTGCACAAACTGCAACTCAATTTGAACAAAGAGAGTTTG
ACCTTCCAGGTACAGGAAGTTTTTGGGATGAAGCAAAAAGAGAAAAAAGAAGTGAGCAAAAAAATTATATGCCAACAGGC
ATATATGTGAAACCTAATGAACAGGTTACAATTACAGTATCAGGAACGCAAAAGATTAGAGCCATTATTGGGACACATCA
ATATGATAAAGAATGGGGAAAAGAAATTGATCTTTCACCTGGCTCTAATACCATCTCTTCACCAAACGGCGGCGTATTAG
GGTTAGATAATTTTCAAAGCACAGGAACAGTTAAGGTGCAAGTAACGCAAGGCGGTAGCCCTATTCCTTTCTTTGTATTA
GGGAAACACACAAAAGCAGACTGGATTGCCATGATGAACAACTATCCAAATGCACATGCAGTACAATTGAAATCAGAACG
AGCGGTGCTAACTGTAACTCGTGATAGTGCCAATAAATATATTGTAAATCAAGATCCTGTGCCCCTATTAAATAAATATG
ATGAAATGATTCGAGCGCAAGACAAGTTAGCAGGGCTATCTGAAACAGATCCTAATCCTTTACATCGTTCAACTCGTCGT
ATTTGGGCCTTTGTAGAAAATCCTAACGCACAAAGTTGGGGCATGTATGCAAGTTGGGATGGAGCCGTCTTTACGACTGC
TGGTGAAGCTATCAAAAGTACTTTAAATGTCAATGAGTTTGGGTGGGGACAAATGCATGAAGCGGGACATGCACGACAAC
AATATCCATGGACGTGGAATGATTTAAGAGGTATGGGTGAAGTAACTAATAATCTATATTCTTTAGCTGCATTCAAGAAA
ATATACCCAAATATACCAACACGTTTAGATACAGAGGGAGATTATAATAGAGCTTTTGCGTATTTAAAACAAACAAATAA
GGAATATAAAAATATTGACGACCTGTTTGTAAAACTTGTTATGCTTTGGCAACTTCATTTGGCATATGGGGATGATTTTT
ATCCAAATCTCCACAAATTATATCGTGAGATACCAGAGGATCAACTTCCCAAAACAGACGAGGATAAAATACAGGAATTT
ATTTACAATACATCGAAAATAGCAAAACAAAATGTACTGCCATTCTTTGATAAATGGGGATTGAAAGCAACACAAGAAAC
GAGACAAAAAGTAGAAGCTTTAAACAATCCAACATTAATTGCACCTATATGGGAAGCGACGGATGCTAAACCTGTTAAAC
CACTTGCTGTATTGTCAAAAAAAATAATGAAGGCAAGTGCAAATAGTGAGGAATCAACGGGCTCAGCTAGTAAGGCGATA
GATGGAAAAACAGATACATTTTGGCATAGTACTTGGACACCAAATCAATATCCTTACAATTTGACACTAGAACTTGGTGA
TACACGTACCATTTCACAATTGGCATATCTTCCAAGGCAAGATTGGTCAGAAAATGGCCGTATTTTAACTTACAATATTT
ATACGAGTGTAGATGGCATTACGTATGACAAAATATCATCAGGAACATGGGAAAATAATAGTGATAAGAAAACGGCAACA
TTTACCCCAGTTACTGCAAAGTATGTAAAAGTGGAAGTAACGAAAGGACAGAATGGATTTGCTTCAGCAGCTGAAGTAGA
TATTTTAGGGTATTAA

Upstream 100 bases:

>100_bases
TTTATAAGTGTGAATTTAAAAAATCCACTTTCGGCATTAGTGAAAAAACTGATATTTCGTATGTAAGTAATAATGAATTT
TAACGAAGGGACTGATCTAT

Downstream 100 bases:

>100_bases
TTATTTTCACTTGTAAATGAGTATATGATCACAGGGTGGATTTTGAAATATTTTGAGGATCTGCCCTGTGATATTTTTTG
CGTATTTCATGTTCTGTTTT

Product: S-layer domain protein

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; Beta-hexosaminidase; GH84; Hexosaminidase B; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MNRRKNCRLQKTIKVFATSAILATTLFTPIMSNNLDVHAETAQTATQFEQREFDLPGTGSFWDEAKREKRSEQKNYMPTG
IYVKPNEQVTITVSGTQKIRAIIGTHQYDKEWGKEIDLSPGSNTISSPNGGVLGLDNFQSTGTVKVQVTQGGSPIPFFVL
GKHTKADWIAMMNNYPNAHAVQLKSERAVLTVTRDSANKYIVNQDPVPLLNKYDEMIRAQDKLAGLSETDPNPLHRSTRR
IWAFVENPNAQSWGMYASWDGAVFTTAGEAIKSTLNVNEFGWGQMHEAGHARQQYPWTWNDLRGMGEVTNNLYSLAAFKK
IYPNIPTRLDTEGDYNRAFAYLKQTNKEYKNIDDLFVKLVMLWQLHLAYGDDFYPNLHKLYREIPEDQLPKTDEDKIQEF
IYNTSKIAKQNVLPFFDKWGLKATQETRQKVEALNNPTLIAPIWEATDAKPVKPLAVLSKKIMKASANSEESTGSASKAI
DGKTDTFWHSTWTPNQYPYNLTLELGDTRTISQLAYLPRQDWSENGRILTYNIYTSVDGITYDKISSGTWENNSDKKTAT
FTPVTAKYVKVEVTKGQNGFASAAEVDILGY

Sequences:

>Translated_591_residues
MNRRKNCRLQKTIKVFATSAILATTLFTPIMSNNLDVHAETAQTATQFEQREFDLPGTGSFWDEAKREKRSEQKNYMPTG
IYVKPNEQVTITVSGTQKIRAIIGTHQYDKEWGKEIDLSPGSNTISSPNGGVLGLDNFQSTGTVKVQVTQGGSPIPFFVL
GKHTKADWIAMMNNYPNAHAVQLKSERAVLTVTRDSANKYIVNQDPVPLLNKYDEMIRAQDKLAGLSETDPNPLHRSTRR
IWAFVENPNAQSWGMYASWDGAVFTTAGEAIKSTLNVNEFGWGQMHEAGHARQQYPWTWNDLRGMGEVTNNLYSLAAFKK
IYPNIPTRLDTEGDYNRAFAYLKQTNKEYKNIDDLFVKLVMLWQLHLAYGDDFYPNLHKLYREIPEDQLPKTDEDKIQEF
IYNTSKIAKQNVLPFFDKWGLKATQETRQKVEALNNPTLIAPIWEATDAKPVKPLAVLSKKIMKASANSEESTGSASKAI
DGKTDTFWHSTWTPNQYPYNLTLELGDTRTISQLAYLPRQDWSENGRILTYNIYTSVDGITYDKISSGTWENNSDKKTAT
FTPVTAKYVKVEVTKGQNGFASAAEVDILGY
>Mature_591_residues
MNRRKNCRLQKTIKVFATSAILATTLFTPIMSNNLDVHAETAQTATQFEQREFDLPGTGSFWDEAKREKRSEQKNYMPTG
IYVKPNEQVTITVSGTQKIRAIIGTHQYDKEWGKEIDLSPGSNTISSPNGGVLGLDNFQSTGTVKVQVTQGGSPIPFFVL
GKHTKADWIAMMNNYPNAHAVQLKSERAVLTVTRDSANKYIVNQDPVPLLNKYDEMIRAQDKLAGLSETDPNPLHRSTRR
IWAFVENPNAQSWGMYASWDGAVFTTAGEAIKSTLNVNEFGWGQMHEAGHARQQYPWTWNDLRGMGEVTNNLYSLAAFKK
IYPNIPTRLDTEGDYNRAFAYLKQTNKEYKNIDDLFVKLVMLWQLHLAYGDDFYPNLHKLYREIPEDQLPKTDEDKIQEF
IYNTSKIAKQNVLPFFDKWGLKATQETRQKVEALNNPTLIAPIWEATDAKPVKPLAVLSKKIMKASANSEESTGSASKAI
DGKTDTFWHSTWTPNQYPYNLTLELGDTRTISQLAYLPRQDWSENGRILTYNIYTSVDGITYDKISSGTWENNSDKKTAT
FTPVTAKYVKVEVTKGQNGFASAAEVDILGY

Specific function: Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015882
- InterPro:   IPR011496
- InterPro:   IPR008965
- InterPro:   IPR000421
- InterPro:   IPR018452
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR008979
- InterPro:   IPR017853
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00754 F5_F8_type_C; PF00041 fn3; PF02838 Glyco_hydro_20b; PF07555 NAGidase [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 66805; Mature: 66805

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRKNCRLQKTIKVFATSAILATTLFTPIMSNNLDVHAETAQTATQFEQREFDLPGTGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCC
FWDEAKREKRSEQKNYMPTGIYVKPNEQVTITVSGTQKIRAIIGTHQYDKEWGKEIDLSP
HHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCHHHHHHHCCCHHHHHHCCEECCCC
GSNTISSPNGGVLGLDNFQSTGTVKVQVTQGGSPIPFFVLGKHTKADWIAMMNNYPNAHA
CCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCEE
VQLKSERAVLTVTRDSANKYIVNQDPVPLLNKYDEMIRAQDKLAGLSETDPNPLHRSTRR
EEEECCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEE
IWAFVENPNAQSWGMYASWDGAVFTTAGEAIKSTLNVNEFGWGQMHEAGHARQQYPWTWN
EEEEEECCCCCCCCEEEECCCEEEECCHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHH
DLRGMGEVTNNLYSLAAFKKIYPNIPTRLDTEGDYNRAFAYLKQTNKEYKNIDDLFVKLV
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCHHHHHHHHH
MLWQLHLAYGDDFYPNLHKLYREIPEDQLPKTDEDKIQEFIYNTSKIAKQNVLPFFDKWG
HHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCC
LKATQETRQKVEALNNPTLIAPIWEATDAKPVKPLAVLSKKIMKASANSEESTGSASKAI
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCC
DGKTDTFWHSTWTPNQYPYNLTLELGDTRTISQLAYLPRQDWSENGRILTYNIYTSVDGI
CCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCE
TYDKISSGTWENNSDKKTATFTPVTAKYVKVEVTKGQNGFASAAEVDILGY
EECCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCEEEECC
>Mature Secondary Structure
MNRRKNCRLQKTIKVFATSAILATTLFTPIMSNNLDVHAETAQTATQFEQREFDLPGTGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCC
FWDEAKREKRSEQKNYMPTGIYVKPNEQVTITVSGTQKIRAIIGTHQYDKEWGKEIDLSP
HHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCHHHHHHHCCCHHHHHHCCEECCCC
GSNTISSPNGGVLGLDNFQSTGTVKVQVTQGGSPIPFFVLGKHTKADWIAMMNNYPNAHA
CCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCEE
VQLKSERAVLTVTRDSANKYIVNQDPVPLLNKYDEMIRAQDKLAGLSETDPNPLHRSTRR
EEEECCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEE
IWAFVENPNAQSWGMYASWDGAVFTTAGEAIKSTLNVNEFGWGQMHEAGHARQQYPWTWN
EEEEEECCCCCCCCEEEECCCEEEECCHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHH
DLRGMGEVTNNLYSLAAFKKIYPNIPTRLDTEGDYNRAFAYLKQTNKEYKNIDDLFVKLV
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCHHHHHHHHH
MLWQLHLAYGDDFYPNLHKLYREIPEDQLPKTDEDKIQEFIYNTSKIAKQNVLPFFDKWG
HHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCC
LKATQETRQKVEALNNPTLIAPIWEATDAKPVKPLAVLSKKIMKASANSEESTGSASKAI
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCC
DGKTDTFWHSTWTPNQYPYNLTLELGDTRTISQLAYLPRQDWSENGRILTYNIYTSVDGI
CCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCE
TYDKISSGTWENNSDKKTATFTPVTAKYVKVEVTKGQNGFASAAEVDILGY
EECCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA