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The map label for this gene is ynbA [H]

Identifier: 218235676

GI number: 218235676

Start: 1740895

End: 1742154

Strand: Direct

Name: ynbA [H]

Synonym: BCB4264_A1835

Alternate gene names: 218235676

Gene position: 1740895-1742154 (Clockwise)

Preceding gene: 218231034

Following gene: 218235000

Centisome position: 32.13

GC content: 35.16

Gene sequence:

>1260_bases
ATGGAAGAAGTATTACAAAGAGCAGTTTTAGTTGGAGTAAATGTAGGTAATGAAGATGATTTTGCGTATTCGATGGAAGA
GTTAACAAATCTTGCGGAAGCCTGCGATGTAGAGGTAATTGGGCAAGTAACGCAAAATTTACAACGAGTAAATCCGTCGC
ATTATATCGGAAAAGGAAAGATTGAAGAAGTAGCAGCGTATGTACGCGAAATAGATGCGAATATGGTCATCTTTAATGAT
GAATTATCTCCTTCACAAATTCGAAATTTAGAAGAGGATTTAGATTGTAAGGTAATTGATCGTACCATTTTAATTTTAGA
TATTTTTGCGCAACGTGCGAAAACGAAAGAAGCACAGCTACAAGTAGAAGTAGCACATCTTCAGTACATGATGCCTCGTT
TAATCGGTCTTCGTGAATCGTTAGGAAGACAGAGCGGCGGCGTTGGTACGAAAAATAAAGGTGTCGGTGAGAAAAAGTTA
GAGTTAGATCGTCGTAAAATTGAAGAACAAATTTCAGTTTTAAATAAAGATTTAGAAGCGCTCGTTGCTCAGCGTCAAAC
ACAGCGAAAGCAACGTAAGAAAAATGAAATACCTGTTGTAGCATTAGTAGGTTATACGAATGCAGGAAAGTCAACGACGA
TGAATGCAATGCTTGAAATTTATAATGGTACAGAAGAAAAGCAAGTATTTGAAAAAGATATGTTATTTGCGACGTTAGAA
ACATCTGTACGAAATATTGATTTGCCAGATAATAAATCATTTTTATTAACAGATACAGTTGGATTTGTAAGTAAATTACC
ACATCATCTTGTGAAGGCGTTCCGTTCAACGTTAGAAGAAGTAGCGGAAGCAGATTTACTTATTCACGTCGTAGATTACG
CAAATCCAAATTATGAACAATTAATTGATATTACAAATGAAACGTTAAAGAAAATTGGAGTAGAAAATATTCCAACGATC
TATGCTTATAACAAATCAGATATGGTGGATGTTGAAATTCCGAAAGTACAAGAAGACCGCGTGTATTTATCTGCGAAGAA
ACATGTTGGAATGGAAGAGCTTGTAGAAATGATTCGTTCCCATATTTATAAAGAATATACGAAATGTGAAATGTTAATTC
CGTATGATCAAGGACAGGTAGTTTCGTATTTCAATAATCATGCGCACGTTTTATCAACGAGTTATGAAAATGAAGGCACG
AAACTAGAAGTGGAATGTAAGACGAGCGATTACGAGAAGTATAAGCGTTTTGTAATTTAA

Upstream 100 bases:

>100_bases
GCTTTCTTCTATTTCTTTGGTGAACCCTTATCCGTTTACGAAAACACAGGCAGCGACCTGTGTTTTTTATTTTACGTAAT
CGAAATGGAGGAATAAATAT

Downstream 100 bases:

>100_bases
TGTAAGAGGCAACCCAGTTTGTGATTGGGTTGCCTTTTTCTATAATGTTTTACTGCTGAAAGTTACAAGGATGCAAGTCA
ATGATGGGAGTTAAGTTATA

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MEEVLQRAVLVGVNVGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGKIEEVAAYVREIDANMVIFND
ELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKL
ELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE
TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGVENIPTI
YAYNKSDMVDVEIPKVQEDRVYLSAKKHVGMEELVEMIRSHIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGT
KLEVECKTSDYEKYKRFVI

Sequences:

>Translated_419_residues
MEEVLQRAVLVGVNVGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGKIEEVAAYVREIDANMVIFND
ELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKL
ELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE
TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGVENIPTI
YAYNKSDMVDVEIPKVQEDRVYLSAKKHVGMEELVEMIRSHIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGT
KLEVECKTSDYEKYKRFVI
>Mature_419_residues
MEEVLQRAVLVGVNVGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGKIEEVAAYVREIDANMVIFND
ELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKL
ELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE
TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGVENIPTI
YAYNKSDMVDVEIPKVQEDRVYLSAKKHVGMEELVEMIRSHIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGT
KLEVECKTSDYEKYKRFVI

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310124269, Length=207, Percent_Identity=34.2995169082126, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310124267, Length=207, Percent_Identity=34.2995169082126, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310124171, Length=207, Percent_Identity=34.2995169082126, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310124169, Length=207, Percent_Identity=34.2995169082126, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310133118, Length=230, Percent_Identity=33.0434782608696, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI310133116, Length=215, Percent_Identity=33.953488372093, Blast_Score=119, Evalue=4e-27,
Organism=Escherichia coli, GI1790615, Length=415, Percent_Identity=37.3493975903614, Blast_Score=276, Evalue=2e-75,
Organism=Caenorhabditis elegans, GI17561038, Length=299, Percent_Identity=32.4414715719064, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24650079, Length=399, Percent_Identity=27.5689223057644, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 47805; Mature: 47805

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVLQRAVLVGVNVGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGK
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
IEEVAAYVREIDANMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQL
HHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKDLEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVAQRQTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQ
HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHH
LIDITNETLKKIGVENIPTIYAYNKSDMVDVEIPKVQEDRVYLSAKKHVGMEELVEMIRS
HHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEHHHCCCHHHHHHHHHH
HIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGTKLEVECKTSDYEKYKRFVI
HHHHHHHHCEEEEECCCCCHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHCCC
>Mature Secondary Structure
MEEVLQRAVLVGVNVGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGK
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
IEEVAAYVREIDANMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQL
HHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKDLEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVAQRQTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQ
HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHH
LIDITNETLKKIGVENIPTIYAYNKSDMVDVEIPKVQEDRVYLSAKKHVGMEELVEMIRS
HHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEHHHCCCHHHHHHHHHH
HIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGTKLEVECKTSDYEKYKRFVI
HHHHHHHHCEEEEECCCCCHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]