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The map label for this gene is gpsA [H]

Identifier: 218235374

GI number: 218235374

Start: 1491376

End: 1492398

Strand: Direct

Name: gpsA [H]

Synonym: BCB4264_A1560

Alternate gene names: 218235374

Gene position: 1491376-1492398 (Clockwise)

Preceding gene: 218231181

Following gene: 218234790

Centisome position: 27.52

GC content: 40.66

Gene sequence:

>1023_bases
ATGACAAAAATCACAGTAGTAGGAGCAGGTAGCTGGGGAACAGCGTTAGCGATGGTATTAGCTGACAATGGACATGATGT
ACGTATTTGGGGAAATCGCCCAGAACTTATGGATGAAATTAATACGAAACATGAGAATAGTCGATATCTCCCAGGCATTA
CATTGCCAAGCACAATCGTAGCCTACTCTTCTTTAGAAGAAGCATTAGTAGATGTAAATACAGTACTGCTAGTAGTACCA
ACGAAAGCGTACAGAGATGTATTACAAGAGATGAAAGAAATTGTTACTGAACCAATTACTTGGATTCATGCGAGCAAAGG
AATTGAACCTGGTACGTCAAAACGTATTTCGGAAGTGATTGAGGAAGAAATTCCAGAGCACTTAATTAAAGATGTTGTTG
TACTGTCTGGACCGAGTCATGCTGAAGAAGTCGGTTTACGACAAGCGACAACAGTTACGTCTGCAGCAAAGCGTATGGAA
GCGGCTGAGGAAGTACAAGATTTATTTATGAATAGTTATTTTCGTGTATACACAAATCCAGATATCGTTGGAGTTGAACT
TGGTGGTGCGTTAAAAAATATTATCGCATTAGCTGCTGGTATAACTGATGGTCTTGGATTAGGTGATAATGCAAAGGCGG
CATTGATGACACGTGGTTTAACAGAGATTGCTCGTTTAGGAAGAAAAATGGGCGGGAATCCGTTAACGTTTGCTGGTCTA
ACTGGTATGGGAGACTTAATTGTAACTTGTACAAGTGTTCATAGCCGAAATTGGCGCGCTGGAAATATGCTTGGAAAAGG
ACACTCTTTAGAAGAAGTGTTAGAAAGCATGGGTATGGTTGTGGAAGGTGTAAGAACAACGAAAGCTGCTCATGAATTGG
CAGAGAAAATGGAAGTTGAAATGCCGATTACAGCTGCTTTATATGACGTGCTGTTCAATGGGAATAACGTAAAAGATGCA
GTAGGCTCATTGATGGGACGTGTTCGAAAACATGAAGTGGAAGCTATACCTGATTTACTGTAA

Upstream 100 bases:

>100_bases
GCGTTTCTTAAAGAATCGCTTACGTGAATCATTTGGCTTCGTAGGAACGCCGATTCACATTATCGCTAGAGCAAGAGACT
AATGGAGAGGATGTGATTTT

Downstream 100 bases:

>100_bases
AGAAAAGCGACAGAAGTACATTTGTACTTCTGTCGCTTTTTTATTTTTTGGGTCTTTTCACCATTTTTTCATTTTTGCAT
AGGATGAAGAGTAACTTGAG

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTKITVVGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNTVLLVVP
TKAYRDVLQEMKEIVTEPITWIHASKGIEPGTSKRISEVIEEEIPEHLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRME
AAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDA
VGSLMGRVRKHEVEAIPDLL

Sequences:

>Translated_340_residues
MTKITVVGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNTVLLVVP
TKAYRDVLQEMKEIVTEPITWIHASKGIEPGTSKRISEVIEEEIPEHLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRME
AAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDA
VGSLMGRVRKHEVEAIPDLL
>Mature_339_residues
TKITVVGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNTVLLVVPT
KAYRDVLQEMKEIVTEPITWIHASKGIEPGTSKRISEVIEEEIPEHLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEA
AEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLT
GMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDAV
GSLMGRVRKHEVEAIPDLL

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=344, Percent_Identity=32.2674418604651, Blast_Score=157, Evalue=9e-39,
Organism=Homo sapiens, GI33695088, Length=346, Percent_Identity=29.7687861271676, Blast_Score=145, Evalue=4e-35,
Organism=Escherichia coli, GI1790037, Length=330, Percent_Identity=42.7272727272727, Blast_Score=285, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI32564399, Length=331, Percent_Identity=32.9305135951662, Blast_Score=144, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI193210136, Length=338, Percent_Identity=32.2485207100592, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32564403, Length=338, Percent_Identity=32.2485207100592, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17507425, Length=341, Percent_Identity=31.9648093841642, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI193210134, Length=331, Percent_Identity=29.9093655589124, Blast_Score=111, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6320181, Length=347, Percent_Identity=31.1239193083574, Blast_Score=144, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6324513, Length=348, Percent_Identity=29.3103448275862, Blast_Score=143, Evalue=4e-35,
Organism=Drosophila melanogaster, GI17136200, Length=351, Percent_Identity=29.9145299145299, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17136204, Length=351, Percent_Identity=29.9145299145299, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17136202, Length=351, Percent_Identity=29.9145299145299, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI22026922, Length=334, Percent_Identity=26.0479041916168, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI45551945, Length=235, Percent_Identity=29.3617021276596, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281362270, Length=235, Percent_Identity=29.3617021276596, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24648969, Length=191, Percent_Identity=29.8429319371728, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 36693; Mature: 36562

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKITVVGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENSRYLPGITLPSTIV
CCEEEEEECCCHHHHEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
AYSSLEEALVDVNTVLLVVPTKAYRDVLQEMKEIVTEPITWIHASKGIEPGTSKRISEVI
HHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHH
EEEIPEHLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNP
HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECC
DIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
CEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVE
CCCCHHHHEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MPITAALYDVLFNGNNVKDAVGSLMGRVRKHEVEAIPDLL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKITVVGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENSRYLPGITLPSTIV
CEEEEEECCCHHHHEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
AYSSLEEALVDVNTVLLVVPTKAYRDVLQEMKEIVTEPITWIHASKGIEPGTSKRISEVI
HHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHH
EEEIPEHLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNP
HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECC
DIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
CEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVE
CCCCHHHHEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MPITAALYDVLFNGNNVKDAVGSLMGRVRKHEVEAIPDLL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA