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The map label for this gene is yshE [H]

Identifier: 218235271

GI number: 218235271

Start: 1557404

End: 1557790

Strand: Direct

Name: yshE [H]

Synonym: BCB4264_A1640

Alternate gene names: 218235271

Gene position: 1557404-1557790 (Clockwise)

Preceding gene: 218230761

Following gene: 218233592

Centisome position: 28.74

GC content: 34.37

Gene sequence:

>387_bases
ATGATTAATTTTTTATTATATTTAGTAGTAACACTCGGCCTTTTATGTATAGGTCTGTTCTTGATGGAAGTGACAACGAA
AGTAAAGGAATTTAAGTTAATGGCTCAAGGAAATAAGGCGGTAAGCTATGTGCTTGGAGGACGATTACTTGGGTTAGCTG
TTGTTTTATATTCGACAGCAGCTAATTCAATTTCACTTCTTGATATGATTTCGTGGGGAGCAGTTGGGATTTTGGCTCAA
ATTATCGTCTTTTATTTAGCTGAGTGGCTTACACCACGCTTTAATATAAACAAAAGTCTCGAAGAAGATAATCAAGCAGT
CGGTCTTTTTCTTATGTTTTTAGCAATTTCAATTGGGATTGTAATTGCTGGTTGTATAACTTATTAA

Upstream 100 bases:

>100_bases
ATTGCTGGAAAAGCGAGTAGTATCGGTATTCGCGCGGGAGAAAAGATTACAGGAAATGAATCGTACTATTTACCGGTAGG
TATAAAAAGGAGGGGAAAAA

Downstream 100 bases:

>100_bases
AAACTTTACGTTTAAACGTAAAGTTTTTTATTTTATCCCGTAAAAGCCCGATTGGTGAGGGCTGATTAAAGTTTCACTTT
ATATATGTTAGTTTGCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MINFLLYLVVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAVVLYSTAANSISLLDMISWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLAISIGIVIAGCITY

Sequences:

>Translated_128_residues
MINFLLYLVVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAVVLYSTAANSISLLDMISWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLAISIGIVIAGCITY
>Mature_128_residues
MINFLLYLVVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAVVLYSTAANSISLLDMISWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLAISIGIVIAGCITY

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

Organism=Escherichia coli, GI1790627, Length=125, Percent_Identity=29.6, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 13983; Mature: 13983

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFLLYLVVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAVVLYSTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ANSISLLDMISWGAVGILAQIIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLAISIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIAGCITY
HHHHHHCC
>Mature Secondary Structure
MINFLLYLVVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAVVLYSTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ANSISLLDMISWGAVGILAQIIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLAISIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIAGCITY
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]