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The map label for this gene is ugpA [H]

Identifier: 218235195

GI number: 218235195

Start: 583578

End: 584510

Strand: Direct

Name: ugpA [H]

Synonym: BCB4264_A0604

Alternate gene names: 218235195

Gene position: 583578-584510 (Clockwise)

Preceding gene: 218234784

Following gene: 218235995

Centisome position: 10.77

GC content: 33.23

Gene sequence:

>933_bases
ATGATCGAAGTAAGTAAGTTACCAGTTCAAACAAAGGTGTCAAAAAAGAAAAAATTATGGGAGAGAACGAAAGATTTAAG
AATAGGATTATTGTTTTTGGCGCCATCTATTTTGCTATTTTCGATTTTTCTGTTCTATCCATTGTTTAGGACGATTTATT
ATAGTTTTTATTTAACCGATATACATGGAGAAGCTAATCTTTTCGTTGGCTTAGAAAATTATCAATATTTATTCTCTGAT
CCAGCCTTCTACAAAAGTATAAAATCAACTTTATTATTTGTTTTATATACAGTTCCTACGAGTATTATATTTGCTTTGTT
TCTTGCATTGATTGCAAATGGAAAGGTAAGAGGTATTGGGTTATTCCGAGTTCTGTTTTCTTCGACGATGGGAATATCAG
TAGCTGCTAGTGCAGTGATTTGGCTATTTTTATTTCATCCAAGTGTAGGATTATTTAATAATATATTAGCCTCTATGAAC
CTTCCTGCAATCGCATGGTTAACGAGTCCGGACTGGGCACTATTCTCTGTATCAGTTACAACAGTTTGGGTGAATACAGG
TTTTGCATTTTTAGTTATATTAGGTGGTTTACAAAATATTGATACGTCTTTATATGAGAGTGCATCTATAGATGGCGCTA
GTTATTTATATAAGCTTCGCCGTGTTACATTACCGATGCTATCACCAACTTTATTCTTTATTGTAACAGTAACATTAATT
AGTGCGTTCCAAAGCTTTGGACAAATTGATATTTTAACGCACGGTGGACCAAATGATGCAACGAATTTAATTGTGTACTC
GATTTACAAAGAGGCGTTTGTGAATCATCAATTTGGAACAGCAAGTGCACAAGCGATGGTATTATTTGTTTTCATTTTCG
TTGCTACATTACTTCAATTTAAGTTTGCTGAGAGAAAGGTGCATTATAAATGA

Upstream 100 bases:

>100_bases
AATTATTATTCCCGCAAGAAAAGTTATGCTTCTTTAACGAAAACACGAATGAACGCTTAAAAGTGGTAGCTGAAGAAGAG
TTGAAAGTGGTGGCGAAATA

Downstream 100 bases:

>100_bases
TTGTTAAACAGTGGAAACAAAATTTCCTATTATACATGCTACTCATTATTAGTGCAGTGATGGTATTTTTTCCTGTACTG
TATGCATTTTTAATAAGCTT

Product: putative glycerol-3-phosphate ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIEVSKLPVQTKVSKKKKLWERTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSD
PAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIGLFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFVATLLQFKFAERKVHYK

Sequences:

>Translated_310_residues
MIEVSKLPVQTKVSKKKKLWERTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSD
PAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIGLFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFVATLLQFKFAERKVHYK
>Mature_310_residues
MIEVSKLPVQTKVSKKKKLWERTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSD
PAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIGLFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFVATLLQFKFAERKVHYK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=289, Percent_Identity=32.8719723183391, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=29.6153846153846, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=25.9842519685039, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34863; Mature: 34863

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVSKLPVQTKVSKKKKLWERTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTD
CCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IHGEANLFVGLENYQYLFSDPAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIG
ECCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
LFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMNLPAIAWLTSPDWALFSVSVT
HHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
TVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
EEEEECCHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFVATLLQF
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KFAERKVHYK
HHHHHHCCCC
>Mature Secondary Structure
MIEVSKLPVQTKVSKKKKLWERTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTD
CCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IHGEANLFVGLENYQYLFSDPAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIG
ECCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
LFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMNLPAIAWLTSPDWALFSVSVT
HHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
TVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
EEEEECCHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFVATLLQF
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KFAERKVHYK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA