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The map label for this gene is gerIA [H]

Identifier: 218235110

GI number: 218235110

Start: 2991795

End: 2993294

Strand: Reverse

Name: gerIA [H]

Synonym: BCB4264_A3121

Alternate gene names: 218235110

Gene position: 2993294-2991795 (Counterclockwise)

Preceding gene: 218233257

Following gene: 218234221

Centisome position: 55.24

GC content: 33.33

Gene sequence:

>1500_bases
TTGAAACCACATGAAAAAGTACCTGTTCACTCTATAAAATCTTTGCAGGAATTAATGCAATTACTAAAAAAATCTAAAGA
TTTTATAACGTTGGAGATCGCTTCAAACAAATCCTCTATAGTCATTTCATATTTTAGAACCTTAATCGATGTAAATATAT
TTCATGAAGAAGTTTTAACTTATATAAAAGAGAAGAGCTTCGATTCATTACAAGATATTCGGTCTGTCTTACCCTTTGAA
AATTCAAAAATAACAAATCAAATGGAAGATATTCAGGATAGTATTTTAAACGGCTATATACTTATTCAGTTCGATACAGA
TAAATTAAATGGCTTGTTAATCAATGTGGCAAAGAAAGAAAAAAGAGATATTACAAAAGCTGAAATTGAATACAATATCG
TGGGTCCACAAATCGCGTTTGTTGAAGATTTAGATGTAAACTTAAATTTAGTACGTAGAAAGCTTCCAACACCTTATTTA
CAAATGAAGGAATTGAAAGTAGGCTCTCTATCTAACACAACCGTTGCGATTGTATATATTGAGGGAATTGTAAATGATCA
AAATCTACAAGAAATTATAAAACGGGTGAGTCTAATAAAAACAGACCACGTTTTGGATAGCACGTATTTGATGCAGTTAA
TTGCAGACAACCCGAATTCTATATTTCCTCAATTTTTGAATACAGAACGACCAGACCGTGTAGCTGCTGTATTGGCAGAA
GGGAAAATTGCACTTTTTGTAGATGGCTCACCTTATGCAATCACTCTTCCAACAACATTAATTGACTTTTTTTCTACGAC
AGAAGATTACACCATGCCTTGGATTATTGCCTCTTTTTTTCGTCTATTAAGGCTTTTTGCTTTTATGTTTTCTGTCTTAA
CGACTCCATTATATGTTGCAATCTTAACATATCATTACGAGCTTATTCCAAAAGAACTTCTTGAAACGTTAATCATATCG
AGAAGTAAAGTACCTTTTCCTCCATTAATTGAAGCGCTTTTTTTAGAAATAACGATTGAATTACTGAGAGAAGCGGGGGC
ACGTTTACCAACTAAAGTGGGTCTAACTGTCGGTATAGTAGGTGGTATTGTAATTGGACAGGCATCTGTAGAGGCAAGTC
TTACAAGTAATGTACTTATTATTATTGTTGCACTTTCAGCGCTTAGCTCATTTACAGCACCAATATATCGAATTGGTAAT
ACAATTCGAGTAATTCGTTTTCCTTTTATAATATCTGCACACCTGTTGGGTTTATTAGGAATTGTTTTAACAAGCTCTTT
GCTTTTAGCACGTTTATTACGTACAGAATCATTAAGACGTCCTTATTTGTTTCCTTTTTATCCTACACGCCCTACAGATT
GGAAAGACAGCATTATCCGTTTGCCGATCTCAGCGATGTTTCGACGTCCTATTTTTTCAAGATCTAAACAGCGTTTTCGT
TTTAATCCAGAAGAGGTAGAGAAAAATAAAATCAAATCACGAAATGATTTTGATGATTGA

Upstream 100 bases:

>100_bases
TTTTTAATGAGCATATTGACATATAAATATCCCTCATTTTTAAAATAGAAATTTCTAAAAACTATATATAGGTTCTTTTT
GAAAGGAAGGGTATTATCAA

Downstream 100 bases:

>100_bases
AATTAACAGGGAGGAGCATTATGAAACAGATCCCAATTGAGTATCAAGTCTCTCCATATATGGTGTTTTTTTTAATTATT
ACTATACAGATGGGGGTTGG

Product: spore germination protein QA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNKSSIVISYFRTLIDVNIFHEEVLTYIKEKSFDSLQDIRSVLPFE
NSKITNQMEDIQDSILNGYILIQFDTDKLNGLLINVAKKEKRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYL
QMKELKVGSLSNTTVAIVYIEGIVNDQNLQEIIKRVSLIKTDHVLDSTYLMQLIADNPNSIFPQFLNTERPDRVAAVLAE
GKIALFVDGSPYAITLPTTLIDFFSTTEDYTMPWIIASFFRLLRLFAFMFSVLTTPLYVAILTYHYELIPKELLETLIIS
RSKVPFPPLIEALFLEITIELLREAGARLPTKVGLTVGIVGGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGN
TIRVIRFPFIISAHLLGLLGIVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRLPISAMFRRPIFSRSKQRFR
FNPEEVEKNKIKSRNDFDD

Sequences:

>Translated_499_residues
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNKSSIVISYFRTLIDVNIFHEEVLTYIKEKSFDSLQDIRSVLPFE
NSKITNQMEDIQDSILNGYILIQFDTDKLNGLLINVAKKEKRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYL
QMKELKVGSLSNTTVAIVYIEGIVNDQNLQEIIKRVSLIKTDHVLDSTYLMQLIADNPNSIFPQFLNTERPDRVAAVLAE
GKIALFVDGSPYAITLPTTLIDFFSTTEDYTMPWIIASFFRLLRLFAFMFSVLTTPLYVAILTYHYELIPKELLETLIIS
RSKVPFPPLIEALFLEITIELLREAGARLPTKVGLTVGIVGGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGN
TIRVIRFPFIISAHLLGLLGIVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRLPISAMFRRPIFSRSKQRFR
FNPEEVEKNKIKSRNDFDD
>Mature_499_residues
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNKSSIVISYFRTLIDVNIFHEEVLTYIKEKSFDSLQDIRSVLPFE
NSKITNQMEDIQDSILNGYILIQFDTDKLNGLLINVAKKEKRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYL
QMKELKVGSLSNTTVAIVYIEGIVNDQNLQEIIKRVSLIKTDHVLDSTYLMQLIADNPNSIFPQFLNTERPDRVAAVLAE
GKIALFVDGSPYAITLPTTLIDFFSTTEDYTMPWIIASFFRLLRLFAFMFSVLTTPLYVAILTYHYELIPKELLETLIIS
RSKVPFPPLIEALFLEITIELLREAGARLPTKVGLTVGIVGGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGN
TIRVIRFPFIISAHLLGLLGIVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRLPISAMFRRPIFSRSKQRFR
FNPEEVEKNKIKSRNDFDD

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56828; Mature: 56828

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNKSSIVISYFRTLIDVNIFHEEVLT
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
YIKEKSFDSLQDIRSVLPFENSKITNQMEDIQDSILNGYILIQFDTDKLNGLLINVAKKE
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHH
KRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYLQMKELKVGSLSNTTVAIVYI
HHCCCHHHEEEEEECCEEEEEECCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEE
EGIVNDQNLQEIIKRVSLIKTDHVLDSTYLMQLIADNPNSIFPQFLNTERPDRVAAVLAE
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHCC
GKIALFVDGSPYAITLPTTLIDFFSTTEDYTMPWIIASFFRLLRLFAFMFSVLTTPLYVA
CCEEEEECCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTYHYELIPKELLETLIISRSKVPFPPLIEALFLEITIELLREAGARLPTKVGLTVGIV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHH
GGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGNTIRVIRFPFIISAHLLGLLG
HHHEEECCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCEEEEEEHHHHHHHHHHHHHH
IVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRLPISAMFRRPIFSRSKQRFR
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHCCHHHCC
FNPEEVEKNKIKSRNDFDD
CCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNKSSIVISYFRTLIDVNIFHEEVLT
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
YIKEKSFDSLQDIRSVLPFENSKITNQMEDIQDSILNGYILIQFDTDKLNGLLINVAKKE
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHH
KRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYLQMKELKVGSLSNTTVAIVYI
HHCCCHHHEEEEEECCEEEEEECCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEE
EGIVNDQNLQEIIKRVSLIKTDHVLDSTYLMQLIADNPNSIFPQFLNTERPDRVAAVLAE
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHCC
GKIALFVDGSPYAITLPTTLIDFFSTTEDYTMPWIIASFFRLLRLFAFMFSVLTTPLYVA
CCEEEEECCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTYHYELIPKELLETLIISRSKVPFPPLIEALFLEITIELLREAGARLPTKVGLTVGIV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHH
GGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGNTIRVIRFPFIISAHLLGLLG
HHHEEECCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCEEEEEEHHHHHHHHHHHHHH
IVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRLPISAMFRRPIFSRSKQRFR
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHCCHHHCC
FNPEEVEKNKIKSRNDFDD
CCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]