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The map label for this gene is yrdR [H]

Identifier: 218234858

GI number: 218234858

Start: 201643

End: 202596

Strand: Direct

Name: yrdR [H]

Synonym: BCB4264_A0231

Alternate gene names: 218234858

Gene position: 201643-202596 (Clockwise)

Preceding gene: 218231691

Following gene: 218231098

Centisome position: 3.72

GC content: 34.49

Gene sequence:

>954_bases
ATGATAATAGGGGCTTTAGCGTGTTTAATTGCGAGTATGTCATGGGGAGCGATGTTTCCAGTTGCTGATCATGCGCTAGA
ATACATAGATCCATTTTATTTTTCGCTTATTCGCTATGGAGCAGTGGCGATAATGCTGATTGTATTGTTGTTAATGAAAG
AAGGAAAACAGGCATTTCGTTTAGAGGGAAGAGGAAAGTTACTCGTCTTTTTTGGAACGATGGCATTTACAGTATATAAT
GTCCTCATATTTTTAGGGCAAATGTTAATGGGTAAGTCGGGTGTAATGGTAGCTTCCATTATGGAAGCACTTATGCCGAT
GATTTCTATTTGTATTTTATGGGGATATAAGCATATAAAACCGAAGAAGTATATGATAACGAGTATGGTTATAGCTTTTG
TAGGAGCTGTATTTGTTATTACAAAAGGTGACATGAGTTTCTTTGTAACATTGAAAGATAATATGTTCCCATTAGCATTT
ATATTTATTGGTGTTGTAGGCTGGGTTATTTATACGATGGGTGGTCAAACTTGTAGTGATTGGTCAACATTACGTTATTC
TACGTTGACGTGTGTATTCGGTACGACTGTTACAGCGATTATAACGGTAATTATTACGTCGCTTGGATATATTTCAGTTC
CGAGTATGGGAACGATTTCTATTGTGAAATATGATTTGTTATTTATGATGACATTGCCAGGTATTGTAGCGCTACTTGCT
TGGAACTATGGTGTAAAAATTTTATCATCCATTAATGGGATTTTATTTATTAATTTTGTACCAATTACGACTTTAGCTAT
TATGATGATGCAAGGGTATCAAATCACAATGTTTGATATTATAGGGACTGTACTTGTTATTGTAGCGCTTATTCGCAATA
ACGTTTGTCAGAGAAAAGAAGAAAATATAAATAAGAGAGTTTTACAAGAAGAACAATTACGTCAAGCTGTTTAA

Upstream 100 bases:

>100_bases
TTAACATCATTTTGAATCATTTTACGTGATATATTTTTTCTTTTACAATTCTCTTTGTGCAAATAGAAAAAAACGGGGGA
TTGTGGTGAGAAGAGGTCAA

Downstream 100 bases:

>100_bases
TAGGCAAATGGAGGATTTCACATGTTAGAAAGTTTATTGTTTTTCTTCGCCGTCGGAGTTGCCTGTGAGCTTGCAGCAAT
TAATCGAAATGGTCGTAAAA

Product: transporter, EamA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIVLLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYN
VLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHIKPKKYMITSMVIAFVGAVFVITKGDMSFFVTLKDNMFPLAF
IFIGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTAIITVIITSLGYISVPSMGTISIVKYDLLFMMTLPGIVALLA
WNYGVKILSSINGILFINFVPITTLAIMMMQGYQITMFDIIGTVLVIVALIRNNVCQRKEENINKRVLQEEQLRQAV

Sequences:

>Translated_317_residues
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIVLLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYN
VLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHIKPKKYMITSMVIAFVGAVFVITKGDMSFFVTLKDNMFPLAF
IFIGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTAIITVIITSLGYISVPSMGTISIVKYDLLFMMTLPGIVALLA
WNYGVKILSSINGILFINFVPITTLAIMMMQGYQITMFDIIGTVLVIVALIRNNVCQRKEENINKRVLQEEQLRQAV
>Mature_317_residues
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIVLLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYN
VLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHIKPKKYMITSMVIAFVGAVFVITKGDMSFFVTLKDNMFPLAF
IFIGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTAIITVIITSLGYISVPSMGTISIVKYDLLFMMTLPGIVALLA
WNYGVKILSSINGILFINFVPITTLAIMMMQGYQITMFDIIGTVLVIVALIRNNVCQRKEENINKRVLQEEQLRQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35273; Mature: 35273

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIVLLLMKEGKQAFR
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
LEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHIK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PKKYMITSMVIAFVGAVFVITKGDMSFFVTLKDNMFPLAFIFIGVVGWVIYTMGGQTCSD
CHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
WSTLRYSTLTCVFGTTVTAIITVIITSLGYISVPSMGTISIVKYDLLFMMTLPGIVALLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
WNYGVKILSSINGILFINFVPITTLAIMMMQGYQITMFDIIGTVLVIVALIRNNVCQRKE
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ENINKRVLQEEQLRQAV
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIVLLLMKEGKQAFR
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
LEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHIK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PKKYMITSMVIAFVGAVFVITKGDMSFFVTLKDNMFPLAFIFIGVVGWVIYTMGGQTCSD
CHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
WSTLRYSTLTCVFGTTVTAIITVIITSLGYISVPSMGTISIVKYDLLFMMTLPGIVALLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
WNYGVKILSSINGILFINFVPITTLAIMMMQGYQITMFDIIGTVLVIVALIRNNVCQRKE
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ENINKRVLQEEQLRQAV
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]