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The map label for this gene is tcyA [H]

Identifier: 218234702

GI number: 218234702

Start: 874338

End: 875135

Strand: Direct

Name: tcyA [H]

Synonym: BCB4264_A0908

Alternate gene names: 218234702

Gene position: 874338-875135 (Clockwise)

Preceding gene: 218235454

Following gene: 218232526

Centisome position: 16.13

GC content: 35.09

Gene sequence:

>798_bases
ATGAAGAAATTATTTTCAGTGCTTGCAGTAACTACATTAGCGATCGGGATTGTAGCCGGCTGCGGTAAAGAAGAGAAAAA
AGATACAGCTAGTCAAGACGCGTTACAAAAGATTAAACAAAGCGGTGAATTTGTAATTGGTACAGAAGGTACATATCCAC
CATTTACGTTCCACGATTCAAGCAATAAATTAACTGGATTCGATGTTGAATTAGCAGAAGAAGTTGCAAAACGTTTAGGT
GTAAAACCTGTATTTAAAGAAACACAATGGGATAGCTTACTTGCTGGCCTAGATGCAAAACGTTTCGATATGGTTGCAAA
CGAAGTTGGTATTCGTGAAGATCGTCAAAAGAAATACGATTTCTCTAAACCATATATTTCATCTTCAGCGGCATTAGTTA
TCGCGAAAGATAAAGATAAGCCTGCTACATTTGCTGATGTAAAAGGGTTAAAAGGAGCACAATCTTTAACGAGTAACTAT
GCAGATATTGCTAAGAAAAACGGTGCGGAAATTATTGGTGTAGAAGGATTTAGCCAAGCGGCAGAATTATTAGCTTCAGG
ACGCGTTGATTTTACAATTAATGATAAGTTATCAGTATTAAATTATTTAGAAACGAAAAAAGATGCAAAAATTAAAATTG
TAGATACAGAAAAAGAAGCTTCACAAAGTGGATTCTTATTCCGTAAAGGTAGCGATAAGCTTGTACAAGAAGTAGATAAA
GCGTTAGAAGATATGAAAAAAGACGGTACGTATGACAAAATAACGAAAAAATGGTTCGGTGAAAATGTATCTAAGTAG

Upstream 100 bases:

>100_bases
ATAAACTAAATAAGAACATTTTCATTGAAAAATTGTTCAAGATTGCATACAATCAATATAGTTTTTAAATTCCTATCAGA
ATACTTGGAGGATTACTATC

Downstream 100 bases:

>100_bases
TGCATTAGTTTCAGATCGATTGTCTACTTGGATAGATATTATGCAGACTTCCTTCATGCCTATGCTGAAGGAAGCTGTTT
TTACAACAATTCCATTAACG

Product: amino acid ABC transporter, amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDSSNKLTGFDVELAEEVAKRLG
VKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLKGAQSLTSNY
ADIAKKNGAEIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFRKGSDKLVQEVDK
ALEDMKKDGTYDKITKKWFGENVSK

Sequences:

>Translated_265_residues
MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDSSNKLTGFDVELAEEVAKRLG
VKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLKGAQSLTSNY
ADIAKKNGAEIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFRKGSDKLVQEVDK
ALEDMKKDGTYDKITKKWFGENVSK
>Mature_265_residues
MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDSSNKLTGFDVELAEEVAKRLG
VKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLKGAQSLTSNY
ADIAKKNGAEIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFRKGSDKLVQEVDK
ALEDMKKDGTYDKITKKWFGENVSK

Specific function: Part of the ABC transporter complex tcyABC involved in L-cystine import [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=256, Percent_Identity=38.28125, Blast_Score=174, Evalue=4e-45,
Organism=Escherichia coli, GI1787085, Length=221, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788648, Length=225, Percent_Identity=32, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787088, Length=220, Percent_Identity=33.1818181818182, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787031, Length=220, Percent_Identity=29.0909090909091, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788649, Length=230, Percent_Identity=30, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29099; Mature: 29099

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDS
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECC
SNKLTGFDVELAEEVAKRLGVKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYD
CCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCC
FSKPYISSSAALVIAKDKDKPATFADVKGLKGAQSLTSNYADIAKKNGAEIIGVEGFSQA
CCCCCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHH
AELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFRKGSDKLVQEVDK
HHHHHCCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCHHCCCCCEEECCCHHHHHHHHH
ALEDMKKDGTYDKITKKWFGENVSK
HHHHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDS
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECC
SNKLTGFDVELAEEVAKRLGVKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYD
CCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCC
FSKPYISSSAALVIAKDKDKPATFADVKGLKGAQSLTSNYADIAKKNGAEIIGVEGFSQA
CCCCCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHH
AELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFRKGSDKLVQEVDK
HHHHHCCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCHHCCCCCEEECCCHHHHHHHHH
ALEDMKKDGTYDKITKKWFGENVSK
HHHHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 8969502; 9384377 [H]