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The map label for this gene is ycgF [H]

Identifier: 218234621

GI number: 218234621

Start: 1593079

End: 1593822

Strand: Direct

Name: ycgF [H]

Synonym: BCB4264_A1668

Alternate gene names: 218234621

Gene position: 1593079-1593822 (Clockwise)

Preceding gene: 218235713

Following gene: 218231907

Centisome position: 29.4

GC content: 32.66

Gene sequence:

>744_bases
ATGGCTCTTTTGTATATTTTGGATAAAAAAGGGTATTTTATTATGAAAGCTAGTCTATTTTTTCAAATTACATCATTAAC
TAGTAGTAAAGAGAGTAGAAAGGATAGAGCGATGTTTGGAGCAATTATACAGCAAATCGTATTAGGTATATCATTAGCTG
CGCCAGTAGGGCCGATTAATATTGAAATGTTAAAACGAGGAATTGAACGTGGGTTTTGGCACGCTTGGGTTGTTGGAATT
GGTGGAATGACTGCAGATGTTTTATTTATGCTTCTCATTTATTTCGGTTTATCTTCTGTGTTTATGTATACATATGTACA
AGCCTTCATGTATTGCACGGGTTTTTTCTTGTTATTTTATTTAGGATTTCAAAGTGTAAAACAAGGAATTTTCGACTCGA
ATATGGAATATAAAAAAGAAGAGGTAGGTGGCCTTAAGCAATCGTTTATGGCAGGATTTTTAATTGCGATATCCAATCCA
TTAAATCTTGTTTTTTGGTTTGGTATATACGGAAGTACACTTAGCTCATTACTTACGAAGGTAACGAAACAAGAAGCTTT
TTTGTACAGTCTTTGCATTATTGTTGGTATTATTTTATGGAATTTAAATATTGCTTTTTCTGTACATTTTGGAAGAACTT
TATTAAAACCAAAAGCGCTTGGCTACATAACAGCCGGAGCAGGTATTATTTTAGTAGGTTACTCTATACATTTTGCATAC
AAAGCTTTACAGTTGTTCACATAA

Upstream 100 bases:

>100_bases
ATCGTGAATGGAAACAATATTTCATAGGAGACGATGTAGAGCCAATAAAAGGGAAATGTCCTTTTCTTCATAGGATAGAA
AAGTAAGAGCCATCACCTAG

Downstream 100 bases:

>100_bases
GATTGAAGGGGAGATTTTTATGTATCGAACCACTATTGACGGAAAAGAAATTATAATTACGTTAGCGCCAAAAATCCGAA
AAGAAATTACTGATAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MALLYILDKKGYFIMKASLFFQITSLTSSKESRKDRAMFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWVVGI
GGMTADVLFMLLIYFGLSSVFMYTYVQAFMYCTGFFLLFYLGFQSVKQGIFDSNMEYKKEEVGGLKQSFMAGFLIAISNP
LNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKPKALGYITAGAGIILVGYSIHFAY
KALQLFT

Sequences:

>Translated_247_residues
MALLYILDKKGYFIMKASLFFQITSLTSSKESRKDRAMFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWVVGI
GGMTADVLFMLLIYFGLSSVFMYTYVQAFMYCTGFFLLFYLGFQSVKQGIFDSNMEYKKEEVGGLKQSFMAGFLIAISNP
LNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKPKALGYITAGAGIILVGYSIHFAY
KALQLFT
>Mature_246_residues
ALLYILDKKGYFIMKASLFFQITSLTSSKESRKDRAMFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWVVGIG
GMTADVLFMLLIYFGLSSVFMYTYVQAFMYCTGFFLLFYLGFQSVKQGIFDSNMEYKKEEVGGLKQSFMAGFLIAISNPL
NLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKPKALGYITAGAGIILVGYSIHFAYK
ALQLFT

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 27659; Mature: 27528

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLYILDKKGYFIMKASLFFQITSLTSSKESRKDRAMFGAIIQQIVLGISLAAPVGPIN
CEEEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IEMLKRGIERGFWHAWVVGIGGMTADVLFMLLIYFGLSSVFMYTYVQAFMYCTGFFLLFY
HHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFQSVKQGIFDSNMEYKKEEVGGLKQSFMAGFLIAISNPLNLVFWFGIYGSTLSSLLTK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKPKALGYITAGAGIILVGYSIHFAY
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCHHCEEEECCCCEEEEHHHHHHHH
KALQLFT
HHHHHCC
>Mature Secondary Structure 
ALLYILDKKGYFIMKASLFFQITSLTSSKESRKDRAMFGAIIQQIVLGISLAAPVGPIN
EEEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IEMLKRGIERGFWHAWVVGIGGMTADVLFMLLIYFGLSSVFMYTYVQAFMYCTGFFLLFY
HHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFQSVKQGIFDSNMEYKKEEVGGLKQSFMAGFLIAISNPLNLVFWFGIYGSTLSSLLTK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKPKALGYITAGAGIILVGYSIHFAY
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCHHCEEEECCCCEEEEHHHHHHHH
KALQLFT
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]