Click here to switch to the map view.

The map label for this gene is yueF [H]

Identifier: 218234607

GI number: 218234607

Start: 2797089

End: 2798174

Strand: Reverse

Name: yueF [H]

Synonym: BCB4264_A2927

Alternate gene names: 218234607

Gene position: 2798174-2797089 (Counterclockwise)

Preceding gene: 218236100

Following gene: 218233492

Centisome position: 51.64

GC content: 33.43

Gene sequence:

>1086_bases
TTGAAATCAAAAGTGCACTTTTGGACATTAGAAGTGCTAATGGTTGTAGGAATCATATTTATTTGCACAAAAATATCATT
TTTATTTCAACCGATTGGTATCTTCATATCAACATTATTTTTCCCAATCTTAATCGCGCTTTTTTTATACTTCATATTTA
ATCCTGTATTAATCTTTTTGGAGAATAAAAAAGTACCTAGAAATTTAGCGATATTGCTGTTATATCTTTTTATCATAACA
TTAACTGCGGTTGGCGTTGGAGTAGTTGTTCCTACGATTTCACAACAGCTAATGGACTTAGTAAAAAATATGCCAGGCTA
CATAAAAGAGGGAAAAGTATACATACAAGAATTATCACATCATAGGTTGTTTGAATGGTTATCTACACAAAACTACGTTT
CCATTGAAACAATTGAAAAAAATGCGATTGAATACTTAAAAGATATACCAAATACAATTACGTCGAGTGCAACGGCTTTA
TTTGGTATTATCACGAACGTTGCATTAGTTGTATTTACTGTACCGTTCATTTTATTTTACATGTTTAAAGATGGACATGC
CTTTCCAGGAAAAGCGGTAAGTTTATTACCAGAGTCTTACCGTGAAGAGGGGCTTCGTATCATTAAGGAAACGAACGAAA
CATTATCTGCATATATTCAAGGGCAAGCGCTCGTTTGTATATTTGTAGGTGCGTTTACTTTTATCGGTTATTTAATTATC
GATTTACCGTACGCTTTCGTTTTAGGAATTATCGCAGCATTTACAAACATCATTCCTAACTTAGGTCCATTTATCGGGGC
AGCACCAGCTGTTATTGTAGGACTGTTCGTATCTCCGATGCAAGCCTTATACGTAATTATTATCGTAACAATTGTACAAC
AGTTTGAAAGTAATATTATTTCACCACGTATTATGAGCTCGAAATTAAACATCCACCCATTAACAATTATTATCCTAATT
TTAGGGGTAGGAAACTTTGCTGGAATCATCGGAATGATTTTAGCAGTACCAGTTTATGCAGTAACAAAAACAGTTGTTTC
GAACTTAGTGAGATTGTTTAAGACGAAGAGAAGTAACCGAAAATAG

Upstream 100 bases:

>100_bases
TTATCGGTATTTTGGAATATTGTAAAGGAAAATATTATGTGAAATTCATACTTATTTTGGTACAATGAAGAGAAGTGCTA
GTTTAAAGGAGGCCATTTTT

Downstream 100 bases:

>100_bases
TAAAAACTGAGGAAGATACACCGCTTTTTAAGTGGTGTATCTTTTGTTTATAAATAAATAATTAAAAGTGGGTTGATTTG
ATTTTATTATATATTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKSKVHFWTLEVLMVVGIIFICTKISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENKKVPRNLAILLLYLFIIT
LTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLKDIPNTITSSATAL
FGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII
DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILI
LGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSNRK

Sequences:

>Translated_361_residues
MKSKVHFWTLEVLMVVGIIFICTKISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENKKVPRNLAILLLYLFIIT
LTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLKDIPNTITSSATAL
FGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII
DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILI
LGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSNRK
>Mature_361_residues
MKSKVHFWTLEVLMVVGIIFICTKISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENKKVPRNLAILLLYLFIIT
LTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLKDIPNTITSSATAL
FGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII
DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILI
LGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSNRK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=320, Percent_Identity=26.5625, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87082271, Length=307, Percent_Identity=24.7557003257329, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787885, Length=310, Percent_Identity=24.1935483870968, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40262; Mature: 40262

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKVHFWTLEVLMVVGIIFICTKISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ENKKVPRNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HRLFEWLSTQNYVSIETIEKNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFY
HHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNII
HHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSNR
CCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure
MKSKVHFWTLEVLMVVGIIFICTKISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ENKKVPRNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HRLFEWLSTQNYVSIETIEKNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFY
HHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNII
HHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSNR
CCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]