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The map label for this gene is rlmN [H]

Identifier: 218234565

GI number: 218234565

Start: 3884815

End: 3885903

Strand: Reverse

Name: rlmN [H]

Synonym: BCB4264_A3963

Alternate gene names: 218234565

Gene position: 3885903-3884815 (Counterclockwise)

Preceding gene: 218233863

Following gene: 218235350

Centisome position: 71.71

GC content: 37.01

Gene sequence:

>1089_bases
ATGGAAACGACTGTAAGAAAACAAAAGAAAAATTTAGAAATGAAGAAACCATCAATTTACTCTTTACAACTTCATGAAAT
GCAAGATTGGTTAAAGGAACAAGGAGAACCGAAGTTCCGTGCTGGACAAATTTTTGATTGGTTATATAAAAAACGTGTAA
AAAATTATGAGGATATGTCAAACCTTTCTAAAGGATTGCGTGATAAATTGTCGAATTCCTTTGATATTACTACTTTAAAC
ACGTTAGTAAAACAAACGTCTTCGGATGGAACAATTAAATTCTTATTCCAATTATATGACGGATATTCTATTGAAACGGT
ATTAATGCGACACGAATATGGAAATTCCATTTGTGTAACAACGCAAGTGGGTTGTCGTATTGGGTGTACGTTCTGTGCTT
CGACACTTGGTGGATTAAAGCGAAACCTAGAAGCTGGAGAAATCGTAGCGCAAGTAGTAGAAGTTCAGCGTGCGCTTGAT
GAAACGGAAGAACGTGTAAGTTCTCTTGTTGTTATGGGGATTGGAGAACCATTTGATAACTATGATAATTTAATGGGATT
CTTACGCATCATTAACCATGAAAAAGGACTTCATATTGGTGCGAGACATATGACTGTTTCGACGAGTGGAATTATCCCGA
AAATTTATAAGTTTGCTGAAGAAGATCTACAAATTAATTTTGCGATTTCATTGCATGCTCCAAACTCAGAATTACGTTCA
AAATTAATGCCGATTAACCGTGCTTATAAATTACCAGATTTAATGGAAGCTATTAAATACTATGTAAATAGAACAGGGCG
TCGTATTACTTTTGAATATGGATTATTTGGAGGAGAAAATGACCAAGTAGAGCATGCTGAAGAGCTTGCTGCGCTCTTAA
AAGGTGTAAAATGTCATGTGAACTTGATTCCGGTAAACTACGTACCTGAACGTGATTATGTACGTACGCCACGTGAACAA
ATTTTCTTGTTCGAGAAAACGTTAAAAGATCGTGGAGTGAATGTAACGATTCGCCGTGAACAAGGTCATGATATTGATGC
AGCCTGCGGTCAGTTGCGTGCGAAGGAGCGCAAAGAAGAGACGAGGTGA

Upstream 100 bases:

>100_bases
TTAACTCCGTATATTGATGAAGGTCAAGTGCAAATTTTACCGCATTATTTTGCGACGGATGGCTTTTATATTGCTTGTTT
AAGGAAGAAGGTGTAGCATC

Downstream 100 bases:

>100_bases
CGAGATGAAAGCCGTATTTCTATCGGATAAAGGAAAAGTTCGTCAACATAATGAAGATAGTGCAGGAGTTTTTCACAATT
TAGATGGAAATGTATTAGCG

Product: ribosomal RNA large subunit methyltransferase N

Products: NA

Alternate protein names: 23S rRNA m2A2503 methyltransferase [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
METTVRKQKKNLEMKKPSIYSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLRDKLSNSFDITTLN
TLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALD
ETEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRS
KLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHVNLIPVNYVPERDYVRTPREQ
IFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKERKEETR

Sequences:

>Translated_362_residues
METTVRKQKKNLEMKKPSIYSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLRDKLSNSFDITTLN
TLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALD
ETEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRS
KLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHVNLIPVNYVPERDYVRTPREQ
IFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKERKEETR
>Mature_362_residues
METTVRKQKKNLEMKKPSIYSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLRDKLSNSFDITTLN
TLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALD
ETEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRS
KLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHVNLIPVNYVPERDYVRTPREQ
IFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKERKEETR

Specific function: Specifically methylates position 2 of adenine 2503 in 23S rRNA [H]

COG id: COG0820

COG function: function code R; Predicted Fe-S-cluster redox enzyme

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. RlmN family [H]

Homologues:

Organism=Escherichia coli, GI1788865, Length=344, Percent_Identity=36.3372093023256, Blast_Score=240, Evalue=9e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197
- InterPro:   IPR004383 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =2.1.1.192 [H]

Molecular weight: Translated: 41583; Mature: 41583

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTVRKQKKNLEMKKPSIYSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMS
CCCHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH
NLSKGLRDKLSNSFDITTLNTLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVT
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEE
TQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDETEERVSSLVVMGIGEPFDN
EECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
YDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRS
HHHHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHHCCEEEEEEEEEECCCHHHHH
KLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHV
HHCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEE
NLIPVNYVPERDYVRTPREQIFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKERKEE
EEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
TR
CC
>Mature Secondary Structure
METTVRKQKKNLEMKKPSIYSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMS
CCCHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH
NLSKGLRDKLSNSFDITTLNTLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVT
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEE
TQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDETEERVSSLVVMGIGEPFDN
EECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
YDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRS
HHHHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHHCCEEEEEEEEEECCCHHHHH
KLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHV
HHCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEE
NLIPVNYVPERDYVRTPREQIFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKERKEE
EEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
TR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA