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The map label for this gene is ecsC [H]

Identifier: 218234408

GI number: 218234408

Start: 1057513

End: 1058220

Strand: Direct

Name: ecsC [H]

Synonym: BCB4264_A1086

Alternate gene names: 218234408

Gene position: 1057513-1058220 (Clockwise)

Preceding gene: 218232317

Following gene: 218233160

Centisome position: 19.51

GC content: 40.82

Gene sequence:

>708_bases
ATGATTACATACGAAGAGAAGGTTATAAAAGAATTGGAGCAGTGGAAAGCTACATTCATGAAAGATTCTTCTATGATGAC
ACGGTTCTCCAAAAAAGTGCAGACGAAGGTGCAACAGCTCATTCCGGCGAAAGTACAAAAGGTACTAACAGAGACGATTC
GTATGATGGTGCAAACGATTAGCGCCGGGTCAAACTTTATAAAGCCGAAACTAAAAGAGACGACATGGTCACTGCAAAGA
CGTGACGATGAAGTTCGTAAAAAAATGGATGAGTACAAAAAAATAGCAGCGGCAGAAGGAGCAGGGACTGGAGCTGGTGG
TATTCTCCTCGGTCTTGCTGACTTTCCGCTTTTACTTACAATTAAAATTAAATTTTTATTCGATGCAGCGACATTGTACG
GATTTGATACGAGTAAACAAGAAGAGCGTCTTTTTATCCTTCACGTTTTCCAACTTGCCTTTTCAAGTGACGATCACCGA
AAAGAAATATGGAAAGCAATCGAAACGTGGGATACAGAAAAAGAAAATCATATGGACTGGGAAAAGTTCCAAACAGAGTA
CCGAGACTATATTGATTTAGCGAAAATGCTTCAGCTCGTACCAGTAATCGGTGCCCCAGTCGGCGCATATGCGAACTATC
AATTACTGCAAAGGCTTGGAGAAGTGACGATGAATTGTTATCGTATGCGATTGCTGAATAGAGATTAA

Upstream 100 bases:

>100_bases
ACAGGAATTTTACTTATCGTAAGCATATTATTTAGTATCGGTTTCGTTTACCAATACGGGGCGAAGCGCATTGAGCGTTT
AAATTGAAAGGAATGAACCT

Downstream 100 bases:

>100_bases
AAACAAGGCGTCCTACATATGTAATGTAGGACGCCTTTTCTTAGAAGCTAAGTCCGATATAGCTAATTCCAGCTATAATC
AATACGATAAAAAGTACAAT

Product: EcsC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MITYEEKVIKELEQWKATFMKDSSMMTRFSKKVQTKVQQLIPAKVQKVLTETIRMMVQTISAGSNFIKPKLKETTWSLQR
RDDEVRKKMDEYKKIAAAEGAGTGAGGILLGLADFPLLLTIKIKFLFDAATLYGFDTSKQEERLFILHVFQLAFSSDDHR
KEIWKAIETWDTEKENHMDWEKFQTEYRDYIDLAKMLQLVPVIGAPVGAYANYQLLQRLGEVTMNCYRMRLLNRD

Sequences:

>Translated_235_residues
MITYEEKVIKELEQWKATFMKDSSMMTRFSKKVQTKVQQLIPAKVQKVLTETIRMMVQTISAGSNFIKPKLKETTWSLQR
RDDEVRKKMDEYKKIAAAEGAGTGAGGILLGLADFPLLLTIKIKFLFDAATLYGFDTSKQEERLFILHVFQLAFSSDDHR
KEIWKAIETWDTEKENHMDWEKFQTEYRDYIDLAKMLQLVPVIGAPVGAYANYQLLQRLGEVTMNCYRMRLLNRD
>Mature_235_residues
MITYEEKVIKELEQWKATFMKDSSMMTRFSKKVQTKVQQLIPAKVQKVLTETIRMMVQTISAGSNFIKPKLKETTWSLQR
RDDEVRKKMDEYKKIAAAEGAGTGAGGILLGLADFPLLLTIKIKFLFDAATLYGFDTSKQEERLFILHVFQLAFSSDDHR
KEIWKAIETWDTEKENHMDWEKFQTEYRDYIDLAKMLQLVPVIGAPVGAYANYQLLQRLGEVTMNCYRMRLLNRD

Specific function: Unknown, does not resemble components of ABC transporters [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27380; Mature: 27380

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYEEKVIKELEQWKATFMKDSSMMTRFSKKVQTKVQQLIPAKVQKVLTETIRMMVQTI
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAGSNFIKPKLKETTWSLQRRDDEVRKKMDEYKKIAAAEGAGTGAGGILLGLADFPLLLT
HCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHH
IKIKFLFDAATLYGFDTSKQEERLFILHVFQLAFSSDDHRKEIWKAIETWDTEKENHMDW
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCH
EKFQTEYRDYIDLAKMLQLVPVIGAPVGAYANYQLLQRLGEVTMNCYRMRLLNRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITYEEKVIKELEQWKATFMKDSSMMTRFSKKVQTKVQQLIPAKVQKVLTETIRMMVQTI
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAGSNFIKPKLKETTWSLQRRDDEVRKKMDEYKKIAAAEGAGTGAGGILLGLADFPLLLT
HCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHH
IKIKFLFDAATLYGFDTSKQEERLFILHVFQLAFSSDDHRKEIWKAIETWDTEKENHMDW
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCH
EKFQTEYRDYIDLAKMLQLVPVIGAPVGAYANYQLLQRLGEVTMNCYRMRLLNRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]