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The map label for this gene is yihY [H]

Identifier: 218234197

GI number: 218234197

Start: 458903

End: 459769

Strand: Direct

Name: yihY [H]

Synonym: BCB4264_A0474

Alternate gene names: 218234197

Gene position: 458903-459769 (Clockwise)

Preceding gene: 218233325

Following gene: 218233428

Centisome position: 8.47

GC content: 35.87

Gene sequence:

>867_bases
ATGAGAAAAATTTTAGAAAAGGTGAGAAGAAATCGTACTTATTCGTTTGGTAAAGATTTATATGACCGGACGATGCGCGA
TGATGTAGCGGGCTTGGCAGCACAGCTCGCTTATTTCTTCTTGCTTGCAATTTTTCCTGGGCTCGTTTTCTTAATTACGC
TTCTTGGATTTATTCCCATTCAAACAGAGGATGTGCTTAGTTTATTAGAGGTTTATGTACCAGATGATGCAATGAACTTA
ATTGAGGTAAATGTAGATAAAGTTGTAAACCAGCAAAATGGTGGTTTATTATCATTTGGTTTATTATCCATGTTATGGTT
TGCCTCAAATGGTGTTAATGCGGTTATGAATGCTTTTAACCGCGCTTATGACGTGAAGGAAACACGTTCTTTTATTACAA
CAAGAGCGTTATCAATTGTGTTTACATTAGCTATTATTTTTATGATTGTCTTTGCGTTAATTGTTCCGGTATTCGGACAA
GTTATTGGAGCAGCAGTGTTTAAAGCACTCGGTTTATCAGATAGCTTTTCTTTCGTATGGAGCATTACACGATTAGTAGC
GAGTTTCTTCGTGCTATTTGCTTTGTTTAGTTTCTTATATACATTTGCACCAGATCGAAAGTTAAAAAGAAGAGAAGTTA
TTTCAGGGGCGTTATTTGCTACTGTAGGATGGATTGTGGTATCGTACTCATTTGCTTATTATGTAGATAAGTTTGCGAAT
TACGCCAATACATATGGTGGTCTCGGTGGTATCATTATTTTAATGTTATGGTTTTACTTAACTGGATGGGTAATTTTACT
TGGCGGTGAAATTAATGGTTTACTCCACCATTATAGAACCGGTGACAATAATTCCCGTAATGAATAA

Upstream 100 bases:

>100_bases
TGAATTATTTATGAAAGACTCAAATGCAGTGGAAAAAAAAACTGAAGCGTACATTGAGTTAAAGCAAGATAAAGAAGAGA
AGAAAAGCGTTTAAACATAT

Downstream 100 bases:

>100_bases
TGAGCTCTTGTTCCATAATAAAAAGGAACAGGGGGGATATTTCATGAGTAATAATAAAAAGAACCATAATAATAAAAGTA
ATAATAAACAAAAGAGCAGT

Product: YihY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYVPDDAMNL
IEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFITTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKALGLSDSFSFVWSITRLVASFFVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFAN
YANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYRTGDNNSRNE

Sequences:

>Translated_288_residues
MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYVPDDAMNL
IEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFITTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKALGLSDSFSFVWSITRLVASFFVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFAN
YANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYRTGDNNSRNE
>Mature_288_residues
MRKILEKVRRNRTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYVPDDAMNL
IEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFITTRALSIVFTLAIIFMIVFALIVPVFGQ
VIGAAVFKALGLSDSFSFVWSITRLVASFFVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFAN
YANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYRTGDNNSRNE

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790319, Length=310, Percent_Identity=25.8064516129032, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 32409; Mature: 32409

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]