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The map label for this gene is ybhR [C]

Identifier: 218234086

GI number: 218234086

Start: 1709138

End: 1710247

Strand: Direct

Name: ybhR [C]

Synonym: BCB4264_A1805

Alternate gene names: 218234086

Gene position: 1709138-1710247 (Clockwise)

Preceding gene: 218233518

Following gene: 218235154

Centisome position: 31.54

GC content: 34.95

Gene sequence:

>1110_bases
TTGAACATCTTCAATATTGCAATTATGCATATTAAAAGAGATTTCAGAGACGTAAGAACTTTAGTTTTTATGTTAGCATT
TCCGATTGTGCTTATGCTTGTGTTAGGAACAGCGTTAACCAACGCATTTAATAGTGATAGTCATTCGATTAAAGATATAC
AAGTGCTATATAAAGATGAAGCGAGTAGCACGTTTTCTCAATCATTTGAAGCATTTACGAAAGAAGTGGATAAATCAGGT
ATTCATTTTAAAAAAGCTTCCGGCAGTATAGATGGGAAAGAAGAAGTGAAGCAAAATAAATATGCCGCTTATGTAGAGTT
AAATAAAGATGGTGCAAAATTTTATGGGAGTGACAAAAGTAGTATTGAGGGAAGTATTGTGGAAGGAATGCTTACAACAT
TTGTTGATAAGTACAATGTAGCGGTCGAAGTTGCAAAAGTAGATCCTACTAAGGTTAGTACGGTTATTTCAAACGGAAAT
CATAATGATTATATAAAAGAAACATCTTTACAAGCTGCGAAAAAACCAGGTTCTATGGATTACTATGCGGTTGTAATGAC
AACGATGATTGCACTATATGCTGCGATGGGAGCGAGTTCTTTAATTCGAGGAGAACGAATACGTAAAACAGGAGATCGTC
TCATTGCTGCACCTATAAGTAAAGCTGAAATATTCATTGGAAAAGTACTTGGTAGCCTAGTAGCAAATGCCCTGTGCATA
TTACTCGTCATGTTATTTAGTAAATTTGTTTTTCAAGCGAATTGGGGCGACCATCTTGGAATCATATTTCTTATTTTATT
AACACAAGTCTTTCTAGCAATTAGCTTTGGTTTAGGAATCGGATATATCACGAAAACAGCTGAAGCGTCTAGGGCAATTA
TTATGGTTGTTGTGCAATTAGCTTCTATTTTTGGAGGTGCATATTTCGTAGTAGAAGAAAATTTCGTTACGAATTTATCG
CCATTAACTTGGGCAAATACAGCTGTTATGAAAATTATTTATGCAAATGATGTAGGGGCAGCACTACCAGTCATTTCTTT
AAACATTGGAATTTCAGCACTCTTTTTATTAATTGCAATTATTGCATTACGTAGACGGGAGGGGCTATAG

Upstream 100 bases:

>100_bases
CAGGCTCCCAACTTAGAAACAGTATTCCTTACATTGACAGGAAGAAACTTACGAGATAAATAAAAAGTAAATGAAGAAAA
GGTAAAGGGAGGTTCATCAA

Downstream 100 bases:

>100_bases
CATGAAGGATATTTTATGGCTCATACAAAAAACGTTATCTGTGCTTTTGAAAAATAAAAAAAGTTTACTCATTATAATTA
GCTTGCCGATAATAGGGACG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Permease Protein; Permease; Multidrug ABC Transporter Permease; ABC-Type MDR Transport System Permease Component; Abc-2 Type Transporter; Streptolysin S Export Transmembrane Protein; Multidrug ABC Transporter; ABC Transport System Permease Protein; ABC Transporter Permease Component; ABC-2 Type Transporter Protein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNIFNIAIMHIKRDFRDVRTLVFMLAFPIVLMLVLGTALTNAFNSDSHSIKDIQVLYKDEASSTFSQSFEAFTKEVDKSG
IHFKKASGSIDGKEEVKQNKYAAYVELNKDGAKFYGSDKSSIEGSIVEGMLTTFVDKYNVAVEVAKVDPTKVSTVISNGN
HNDYIKETSLQAAKKPGSMDYYAVVMTTMIALYAAMGASSLIRGERIRKTGDRLIAAPISKAEIFIGKVLGSLVANALCI
LLVMLFSKFVFQANWGDHLGIIFLILLTQVFLAISFGLGIGYITKTAEASRAIIMVVVQLASIFGGAYFVVEENFVTNLS
PLTWANTAVMKIIYANDVGAALPVISLNIGISALFLLIAIIALRRREGL

Sequences:

>Translated_369_residues
MNIFNIAIMHIKRDFRDVRTLVFMLAFPIVLMLVLGTALTNAFNSDSHSIKDIQVLYKDEASSTFSQSFEAFTKEVDKSG
IHFKKASGSIDGKEEVKQNKYAAYVELNKDGAKFYGSDKSSIEGSIVEGMLTTFVDKYNVAVEVAKVDPTKVSTVISNGN
HNDYIKETSLQAAKKPGSMDYYAVVMTTMIALYAAMGASSLIRGERIRKTGDRLIAAPISKAEIFIGKVLGSLVANALCI
LLVMLFSKFVFQANWGDHLGIIFLILLTQVFLAISFGLGIGYITKTAEASRAIIMVVVQLASIFGGAYFVVEENFVTNLS
PLTWANTAVMKIIYANDVGAALPVISLNIGISALFLLIAIIALRRREGL
>Mature_369_residues
MNIFNIAIMHIKRDFRDVRTLVFMLAFPIVLMLVLGTALTNAFNSDSHSIKDIQVLYKDEASSTFSQSFEAFTKEVDKSG
IHFKKASGSIDGKEEVKQNKYAAYVELNKDGAKFYGSDKSSIEGSIVEGMLTTFVDKYNVAVEVAKVDPTKVSTVISNGN
HNDYIKETSLQAAKKPGSMDYYAVVMTTMIALYAAMGASSLIRGERIRKTGDRLIAAPISKAEIFIGKVLGSLVANALCI
LLVMLFSKFVFQANWGDHLGIIFLILLTQVFLAISFGLGIGYITKTAEASRAIIMVVVQLASIFGGAYFVVEENFVTNLS
PLTWANTAVMKIIYANDVGAALPVISLNIGISALFLLIAIIALRRREGL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40277; Mature: 40277

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFNIAIMHIKRDFRDVRTLVFMLAFPIVLMLVLGTALTNAFNSDSHSIKDIQVLYKDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCC
ASSTFSQSFEAFTKEVDKSGIHFKKASGSIDGKEEVKQNKYAAYVELNKDGAKFYGSDKS
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCC
SIEGSIVEGMLTTFVDKYNVAVEVAKVDPTKVSTVISNGNHNDYIKETSLQAAKKPGSMD
CCCHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHEECCCCCCHHHHHHHHHHCCCCCCH
YYAVVMTTMIALYAAMGASSLIRGERIRKTGDRLIAAPISKAEIFIGKVLGSLVANALCI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
LLVMLFSKFVFQANWGDHLGIIFLILLTQVFLAISFGLGIGYITKTAEASRAIIMVVVQL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHH
ASIFGGAYFVVEENFVTNLSPLTWANTAVMKIIYANDVGAALPVISLNIGISALFLLIAI
HHHHCCEEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCEEEHHHHHHHHHHHHH
IALRRREGL
HHHHHHCCC
>Mature Secondary Structure
MNIFNIAIMHIKRDFRDVRTLVFMLAFPIVLMLVLGTALTNAFNSDSHSIKDIQVLYKDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCC
ASSTFSQSFEAFTKEVDKSGIHFKKASGSIDGKEEVKQNKYAAYVELNKDGAKFYGSDKS
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCC
SIEGSIVEGMLTTFVDKYNVAVEVAKVDPTKVSTVISNGNHNDYIKETSLQAAKKPGSMD
CCCHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHEECCCCCCHHHHHHHHHHCCCCCCH
YYAVVMTTMIALYAAMGASSLIRGERIRKTGDRLIAAPISKAEIFIGKVLGSLVANALCI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
LLVMLFSKFVFQANWGDHLGIIFLILLTQVFLAISFGLGIGYITKTAEASRAIIMVVVQL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHH
ASIFGGAYFVVEENFVTNLSPLTWANTAVMKIIYANDVGAALPVISLNIGISALFLLIAI
HHHHCCEEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCEEEHHHHHHHHHHHHH
IALRRREGL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA