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The map label for this gene is sun [H]

Identifier: 218233863

GI number: 218233863

Start: 3885908

End: 3887242

Strand: Reverse

Name: sun [H]

Synonym: BCB4264_A3964

Alternate gene names: 218233863

Gene position: 3887242-3885908 (Counterclockwise)

Preceding gene: 218233113

Following gene: 218234565

Centisome position: 71.73

GC content: 37.45

Gene sequence:

>1335_bases
ATGAGACAAAATGTTCGTGAATTAGCTCTTGATGGTTTAATTCAAGTGGAAAAAAGTGGTGCATATAGCAACTTACTTTT
AAATAATCTAATTGAAAAAAGTGCAATTGATAGAAAAGATATTGGTTTATTAACTGAAATTGTATATGGAACGATTCAAC
GTCGTGACACATTAGATTATTATTTACAGCCTTTTTTAAAAAAGAAGGTTGAGGCGTGGGTAAGAGTATTGCTTCGCTTA
TCTTTATATCAAATGATTTATTTAGACCGAGTGCCAGAAAGAGCGGCTATTCATGAAGCGGTTGAGATTGCAAAGCGTCG
CGGGCATAAAGGAATTGCTGGTATGGTGAACGGTGTATTACGTTCGATTCAGAGAGAAGGTGTACCTTCTGTAGATGAAA
TCAAGGATCCAGTAGAACGTCTTGCAATTACAACAAGTCATCCAGTTTGGCTTGTCCAAGAGTGGACTTCAGAATACGGT
TTAGAAACTGCAGAAAAAATGTGCGAAGTAAACATGTTACCCCCTGTACCAACAGCGCGTGTGAATGTTGATAAGGTAAC
TGTAGAAGAAGCGATTGAGTTGTTGGCAAGTGAAGGTATAGAAGCAAAACGTGGTGACTTATCAGATGATGCTATTCAGA
TTGAAAGAGGAAATGTAGCGCATACAGAAGCGTTTAAAAAAGGATTTCTTTCTATTCAAGATGAAAGTTCTATGCTTGTA
GCACGCGCTTTAGAACCGAATACGGGAGATGCAGTTCTTGATAGTTGTGCTGCTCCAGGCGGAAAAACAACGCATATCGC
GGAACGATTAAAGGGAACTGGTAAGGTCATGTCCCTTGATTTACATGCACACAAAGTACGTTTAATTAAACAGCAAGCAG
AGCGACTTGGTCTAGAAAATGTCGAAACTAAAGCGCTAGATGCTAGAAAAGTGCAAGAGCACTTTGCAAATGAAACGTTT
GATAAAATATTGGTAGATGCACCGTGTTCTGGATTTGGTGTAATTAGACGTAAACCTGATATTAAGTTAGGAAAAGATAA
AGGCGATAGTGAAAGATTATCGACGATTCAAATTGCAATACTAGAAAAAATAGCACCATTATTAAAACAAGGCGGTCGTC
TTGTTTATAGTACGTGCACAATTGAGAAAATAGAAAATGAACAAGTAATAGAGAAATTTTTACAAGAACATCCTGAATTT
GAATGGGATACTACGCTTAAAGAGCGTATGCCAGAAAAATTAACTCCGTATATTGATGAAGGTCAAGTGCAAATTTTACC
GCATTATTTTGCGACGGATGGCTTTTATATTGCTTGTTTAAGGAAGAAGGTGTAG

Upstream 100 bases:

>100_bases
AAATTACTGAATTGCAACCTTCTGGTAAAAAGCGTATGAGTTGTTCACAATTTTTACGTGGAACAAAACCTGAAATTGGA
ACGAAGTTAGGAGAAAATGC

Downstream 100 bases:

>100_bases
CATCATGGAAACGACTGTAAGAAAACAAAAGAAAAATTTAGAAATGAAGAAACCATCAATTTACTCTTTACAACTTCATG
AAATGCAAGATTGGTTAAAG

Product: sun protein

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSAIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAITTSHPVWLVQEWTSEYG
LETAEKMCEVNMLPPVPTARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERGNVAHTEAFKKGFLSIQDESSMLV
ARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQIAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIEKFLQEHPEF
EWDTTLKERMPEKLTPYIDEGQVQILPHYFATDGFYIACLRKKV

Sequences:

>Translated_444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSAIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAITTSHPVWLVQEWTSEYG
LETAEKMCEVNMLPPVPTARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERGNVAHTEAFKKGFLSIQDESSMLV
ARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQIAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIEKFLQEHPEF
EWDTTLKERMPEKLTPYIDEGQVQILPHYFATDGFYIACLRKKV
>Mature_444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSAIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAITTSHPVWLVQEWTSEYG
LETAEKMCEVNMLPPVPTARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERGNVAHTEAFKKGFLSIQDESSMLV
ARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQIAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIEKFLQEHPEF
EWDTTLKERMPEKLTPYIDEGQVQILPHYFATDGFYIACLRKKV

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=357, Percent_Identity=30.5322128851541, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI76150623, Length=357, Percent_Identity=30.5322128851541, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI32698918, Length=181, Percent_Identity=38.121546961326, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI301336155, Length=284, Percent_Identity=28.8732394366197, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI39995082, Length=284, Percent_Identity=28.8732394366197, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI270288818, Length=233, Percent_Identity=30.4721030042918, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI8922322, Length=233, Percent_Identity=30.4721030042918, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI23199998, Length=233, Percent_Identity=30.4721030042918, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI270288816, Length=233, Percent_Identity=30.4721030042918, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI11545785, Length=173, Percent_Identity=35.2601156069364, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI40316918, Length=197, Percent_Identity=28.4263959390863, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI2367212, Length=446, Percent_Identity=32.0627802690583, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI87081985, Length=270, Percent_Identity=32.2222222222222, Blast_Score=141, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17536757, Length=235, Percent_Identity=35.7446808510638, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71998419, Length=223, Percent_Identity=33.1838565022422, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115534021, Length=223, Percent_Identity=33.1838565022422, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25143471, Length=190, Percent_Identity=35.2631578947368, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324268, Length=324, Percent_Identity=29.0123456790123, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319447, Length=183, Percent_Identity=33.879781420765, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6324306, Length=216, Percent_Identity=26.8518518518519, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI22024126, Length=236, Percent_Identity=31.7796610169492, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI21355201, Length=282, Percent_Identity=29.7872340425532, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24668781, Length=234, Percent_Identity=32.0512820512821, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21356513, Length=234, Percent_Identity=32.0512820512821, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21356579, Length=232, Percent_Identity=29.7413793103448, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19920494, Length=217, Percent_Identity=34.1013824884793, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 49984; Mature: 49984

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSAIDRKDIGLLTEIVYGTIQRRDTLDY
CCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
YLQPFLKKKVEAWVRVLLRLSLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSIQREGVPSVDEIKDPVERLAITTSHPVWLVQEWTSEYGLETAEKMCEVNMLPPVPTAR
HHHHHCCCCCHHHHHHHHHHHEECCCCCEEEHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
VNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERGNVAHTEAFKKGFLSIQDESSMLV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEECCCCCEEE
ARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLIKQQAERLGLEN
HEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
VETKALDARKVQEHFANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQIAI
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHH
LEKIAPLLKQGGRLVYSTCTIEKIENEQVIEKFLQEHPEFEWDTTLKERMPEKLTPYIDE
HHHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCC
GQVQILPHYFATDGFYIACLRKKV
CCEEEECHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSAIDRKDIGLLTEIVYGTIQRRDTLDY
CCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
YLQPFLKKKVEAWVRVLLRLSLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSIQREGVPSVDEIKDPVERLAITTSHPVWLVQEWTSEYGLETAEKMCEVNMLPPVPTAR
HHHHHCCCCCHHHHHHHHHHHEECCCCCEEEHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
VNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERGNVAHTEAFKKGFLSIQDESSMLV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEECCCCCEEE
ARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLIKQQAERLGLEN
HEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
VETKALDARKVQEHFANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQIAI
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHH
LEKIAPLLKQGGRLVYSTCTIEKIENEQVIEKFLQEHPEFEWDTTLKERMPEKLTPYIDE
HHHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCC
GQVQILPHYFATDGFYIACLRKKV
CCEEEECHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377; 9086272 [H]