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The map label for this gene is yebA [C]

Identifier: 218233126

GI number: 218233126

Start: 1422849

End: 1424114

Strand: Reverse

Name: yebA [C]

Synonym: BCB4264_A1486

Alternate gene names: 218233126

Gene position: 1424114-1422849 (Counterclockwise)

Preceding gene: 218233795

Following gene: 218232347

Centisome position: 26.28

GC content: 35.7

Gene sequence:

>1266_bases
ATGAAAAAGAAATTTGCAGCGTTTAGCGTTTTAGCAGCAGGAACGATTTTTGCTTCCCCGTTACTTTCACCCGTATACGC
TGAAACGAATCAAGATAAATTATCTAACATTCAATCTGAATTAGAAGGCAAACAAAGTGACTTACAAAATAAATCAGTCG
AGAAAGAACAAATAGAAAAAGAAATTCAAGAATTACAGAAGAAAATCGATGAATTAACTACTTCCATTAATAAAAATGAG
ACTGAATTAAACGATACAAAAAAAGAAATTAGCAAAACACAACAAGTAATTACTGACAAAAAGAAACATATAGAACAATT
ACAAACAAACATAGATACACGTCAGGAAGTTATTAAACAACGATTACAATCTATGCAAGAAAAACCGCGTACAAATATCA
TTACAGAAGTATTAACAAACTCTACAAACATTGCTGATCTTGTTGATAATATGTACTCCGTAAGTTTAATATTAAACAAC
GATACAGATATTGTAAAAAAACAAACATCTGATCAAAATGCTGTAACGACAGAAAAAGAGGCTGTTGAGAAAAAAGAACA
ACAACTGAAAGACTCTGAACAAAAACTAGAACAAAAACAACAAGAATTACAAAATAATCAACAGCAGCAACAAACTCTTA
TTAACGATCTACATACGAAAGTAGCAAAAGTAGATTCAGAGATTGAAGGATTAGAAGAATCCAAGGGCATTTTAGAAAAT
CAACGTCAAGCTGTTCAAAAAGCAATTGAAGAAGAAAAACGGGCGGAAGAAGCTCGTAAAGCGGAAGAAGCCCGCCAGGC
AGAAGAGGCTCGCAAACAACAAGCTACTAAATCTGCTCAAGCGGCCCCAACACCACATGATACAAATATCGGTGGTTTTA
TCAAACCAGCAGCTGGATCAAAAACTTCCGGATTTGGTGTACGTTCTTTAGATAACCATAAAGGAATTGACATCGCTGCT
TCGGGAACGGTTCCAATTATCGCTGCTGCAGATGGCGTTGTTATTCGCTCAGAATTATCATCTAGTTACGGAAACGTAGT
GTATTTATCTCACCGTATAAACGGAAAAACATATACGACAGTATATGCTCATATGAATAGTCGTTCTGTATCGAATGGAC
AAACTGTAAAACAAGGCGATCAGCTTGGATTTATGGGGAATACGGGCCAATCATACGGACAACATTTACACTTCGAACTT
CATCTTGGAGAATGGAATGTCGGCAAGACAAACGCAGTTGACCCATCTCCTTATATCGGATTATAA

Upstream 100 bases:

>100_bases
CTTAGCAATTTTATAAAATTTTCTTTACATTATGATTACAACGATAGACACCCTTCTTCTTATGATATATAACATTCATA
GGGAAAGGAGTCAGACAACA

Downstream 100 bases:

>100_bases
AAAACCTCGGTGCCTACCGAGGTTTTTCATTTACACTTCACACAATATAGGCGTTCTACATAGACTATAACTAAATGCCT
ATAGTTGACGAGGTGATCCA

Product: cell wall endopeptidase, family M23/M37

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKKKFAAFSVLAAGTIFASPLLSPVYAETNQDKLSNIQSELEGKQSDLQNKSVEKEQIEKEIQELQKKIDELTTSINKNE
TELNDTKKEISKTQQVITDKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTNSTNIADLVDNMYSVSLILNN
DTDIVKKQTSDQNAVTTEKEAVEKKEQQLKDSEQKLEQKQQELQNNQQQQQTLINDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARQAEEARKQQATKSAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSLDNHKGIDIAA
SGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMNSRSVSNGQTVKQGDQLGFMGNTGQSYGQHLHFEL
HLGEWNVGKTNAVDPSPYIGL

Sequences:

>Translated_421_residues
MKKKFAAFSVLAAGTIFASPLLSPVYAETNQDKLSNIQSELEGKQSDLQNKSVEKEQIEKEIQELQKKIDELTTSINKNE
TELNDTKKEISKTQQVITDKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTNSTNIADLVDNMYSVSLILNN
DTDIVKKQTSDQNAVTTEKEAVEKKEQQLKDSEQKLEQKQQELQNNQQQQQTLINDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARQAEEARKQQATKSAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSLDNHKGIDIAA
SGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMNSRSVSNGQTVKQGDQLGFMGNTGQSYGQHLHFEL
HLGEWNVGKTNAVDPSPYIGL
>Mature_421_residues
MKKKFAAFSVLAAGTIFASPLLSPVYAETNQDKLSNIQSELEGKQSDLQNKSVEKEQIEKEIQELQKKIDELTTSINKNE
TELNDTKKEISKTQQVITDKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTNSTNIADLVDNMYSVSLILNN
DTDIVKKQTSDQNAVTTEKEAVEKKEQQLKDSEQKLEQKQQELQNNQQQQQTLINDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARQAEEARKQQATKSAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSLDNHKGIDIAA
SGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMNSRSVSNGQTVKQGDQLGFMGNTGQSYGQHLHFEL
HLGEWNVGKTNAVDPSPYIGL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=90, Percent_Identity=38.8888888888889, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082297, Length=457, Percent_Identity=22.3194748358862, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46826; Mature: 46826

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFAAFSVLAAGTIFASPLLSPVYAETNQDKLSNIQSELEGKQSDLQNKSVEKEQIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
EIQELQKKIDELTTSINKNETELNDTKKEISKTQQVITDKKKHIEQLQTNIDTRQEVIKQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLQSMQEKPRTNIITEVLTNSTNIADLVDNMYSVSLILNNDTDIVKKQTSDQNAVTTEKE
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHHCCCCCCCCCHHHH
AVEKKEQQLKDSEQKLEQKQQELQNNQQQQQTLINDLHTKVAKVDSEIEGLEESKGILEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQAVQKAIEEEKRAEEARKAEEARQAEEARKQQATKSAQAAPTPHDTNIGGFIKPAAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
KTSGFGVRSLDNHKGIDIAASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTT
CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEHHHHHCCCCCEEEEEEECCCCEEEE
VYAHMNSRSVSNGQTVKQGDQLGFMGNTGQSYGQHLHFELHLGEWNVGKTNAVDPSPYIG
EEEECCCCCCCCCCCHHCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC
L
C
>Mature Secondary Structure
MKKKFAAFSVLAAGTIFASPLLSPVYAETNQDKLSNIQSELEGKQSDLQNKSVEKEQIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
EIQELQKKIDELTTSINKNETELNDTKKEISKTQQVITDKKKHIEQLQTNIDTRQEVIKQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLQSMQEKPRTNIITEVLTNSTNIADLVDNMYSVSLILNNDTDIVKKQTSDQNAVTTEKE
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHHCCCCCCCCCHHHH
AVEKKEQQLKDSEQKLEQKQQELQNNQQQQQTLINDLHTKVAKVDSEIEGLEESKGILEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQAVQKAIEEEKRAEEARKAEEARQAEEARKQQATKSAQAAPTPHDTNIGGFIKPAAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
KTSGFGVRSLDNHKGIDIAASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTT
CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEHHHHHCCCCCEEEEEEECCCCEEEE
VYAHMNSRSVSNGQTVKQGDQLGFMGNTGQSYGQHLHFELHLGEWNVGKTNAVDPSPYIG
EEEECCCCCCCCCCCHHCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]