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The map label for this gene is 218233122

Identifier: 218233122

GI number: 218233122

Start: 3617476

End: 3618513

Strand: Reverse

Name: 218233122

Synonym: BCB4264_A3698

Alternate gene names: NA

Gene position: 3618513-3617476 (Counterclockwise)

Preceding gene: 218232287

Following gene: 218232428

Centisome position: 66.77

GC content: 32.47

Gene sequence:

>1038_bases
ATGGGGAATCATTCATCTTTAAGAGAAGAGAAAAATAAGCAAAAATATAAAAAGAAAAAGATAATAAGTTTACTACTGGC
GGTATTACTATTTGGTGGAATTGGCTATGGAGCCTATGTATATATGAAAACTTCTAGTCTTGTACAAAAATCTAATTTGA
ATTTAGCACGAGGTGAAAAATCCAATTTACGTGAGAAATCTGTAAAGCCAATTGCAAATCATGTTTCACTTTTAATTATG
GGAATTGATGAAAATCAAGAACGACAAAAGGAATATAATGGTGCATTTCATACAGATGCATTATTGTTAGCGACTTTTAA
TAAAGACGATAAAACAGTGAAATTAACGAGCATACCGCGTGATACATATACATATGTTCCAGTTGAAAAGAAAAAAGATA
AAATAACCCATGCATATGGAAGTGGTTTCGTTAAAAATGGTAAAGATGGAGGACCGCAAGCTTCTGTGGAAGCGGTAGAA
AAATTGTTACAGGTGCCTGTTGATTATTTTGTGAAATTTAATTTTGGTTCCTTTACTAAAATTGTTGATGGGTTAGATGG
TATTGAAGTGGATGTCCCAGTTGAATTTACGGAGCAAAATAGTAAAGATGAACCTGATGCGATTCATTTGAAAAAAGGAT
TACAAAAATTAAATGGGGAAGAAGCACTTGCACTAGCAAGAACGCGGCATATTGATAGTGATGCAATGAGAGGGCAGCGC
CAACAACTTGTTATTGAAGCGATTTTAAGTAAATTAAAAAGTGTAGGATCGATTACGAAGCTAGAAAAAATAGTTGAGGC
GGTTGATGGTGATTTTAAAACAAATTTAGTAATGGATGATATTTTATCTTTTTATAAATACGGTTTAAACGGTTCAGTTG
AAAAAATACAATTAGCTGGTGATGATTTATACTTACCTAATGGCCCAAACGGGCAACGTGTATATTATTATAATCCTAAT
AAAAAAGATCTACAGAGTTTGAGTAATACTCTTAGAACACATCTAGGATTAAGTGAAAAACAGATTGAGGAGAATTAA

Upstream 100 bases:

>100_bases
AAATAGATAAGGGATTGAAAGAAAGTATGTTTCAAAAGGATAGCGCTAAATATGAAAAAATGAAAAACATATTGGATGAA
TAGAAACAGGAGGAGAGTAA

Downstream 100 bases:

>100_bases
AGCAGATGTAATGTCTGCTTTTTTATTATGTTAAATAGTATGTCTTTTATTCGTAAATGTTATATGCTATTTTAAAGTTT
AAGATAATAGTGTAACATAA

Product: transcription antiterminator, LytR family

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MGNHSSLREEKNKQKYKKKKIISLLLAVLLFGGIGYGAYVYMKTSSLVQKSNLNLARGEKSNLREKSVKPIANHVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVE
KLLQVPVDYFVKFNFGSFTKIVDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVIEAILSKLKSVGSITKLEKIVEAVDGDFKTNLVMDDILSFYKYGLNGSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKQIEEN

Sequences:

>Translated_345_residues
MGNHSSLREEKNKQKYKKKKIISLLLAVLLFGGIGYGAYVYMKTSSLVQKSNLNLARGEKSNLREKSVKPIANHVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVE
KLLQVPVDYFVKFNFGSFTKIVDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVIEAILSKLKSVGSITKLEKIVEAVDGDFKTNLVMDDILSFYKYGLNGSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKQIEEN
>Mature_344_residues
GNHSSLREEKNKQKYKKKKIISLLLAVLLFGGIGYGAYVYMKTSSLVQKSNLNLARGEKSNLREKSVKPIANHVSLLIMG
IDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVEK
LLQVPVDYFVKFNFGSFTKIVDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQRQ
QLVIEAILSKLKSVGSITKLEKIVEAVDGDFKTNLVMDDILSFYKYGLNGSVEKIQLAGDDLYLPNGPNGQRVYYYNPNK
KDLQSLSNTLRTHLGLSEKQIEEN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 38590; Mature: 38458

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNHSSLREEKNKQKYKKKKIISLLLAVLLFGGIGYGAYVYMKTSSLVQKSNLNLARGEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCCCH
SNLREKSVKPIANHVSLLIMGIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPR
HHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
DTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVEKLLQVPVDYFVKFNFGSFTK
CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCHHH
IVDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
HHCCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCHH
QQLVIEAILSKLKSVGSITKLEKIVEAVDGDFKTNLVMDDILSFYKYGLNGSVEKIQLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECC
DDLYLPNGPNGQRVYYYNPNKKDLQSLSNTLRTHLGLSEKQIEEN
CEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure 
GNHSSLREEKNKQKYKKKKIISLLLAVLLFGGIGYGAYVYMKTSSLVQKSNLNLARGEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCCCH
SNLREKSVKPIANHVSLLIMGIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPR
HHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
DTYTYVPVEKKKDKITHAYGSGFVKNGKDGGPQASVEAVEKLLQVPVDYFVKFNFGSFTK
CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCHHH
IVDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
HHCCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCHH
QQLVIEAILSKLKSVGSITKLEKIVEAVDGDFKTNLVMDDILSFYKYGLNGSVEKIQLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECC
DDLYLPNGPNGQRVYYYNPNKKDLQSLSNTLRTHLGLSEKQIEEN
CEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]