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The map label for this gene is smF [H]

Identifier: 218232997

GI number: 218232997

Start: 3855240

End: 3856109

Strand: Reverse

Name: smF [H]

Synonym: BCB4264_A3932

Alternate gene names: 218232997

Gene position: 3856109-3855240 (Counterclockwise)

Preceding gene: 218232394

Following gene: 218232018

Centisome position: 71.16

GC content: 34.83

Gene sequence:

>870_bases
ATGAAAAGAGAGAGATTATTACATCTTCATTACTTGCTAGCAGATTATTGGAAGGCGATGGAGAGGCTACTATATGTCGA
TCCAGAATTAAAGAACATATATAAATTTAACGAAAAACAAATGGAACACTACACTGGAATATCCTCGAAAAAATCTTCAG
AACTAGTAAAATTTCTTCAAAGTTCAAATCTTCCGCAATATATATCTTATTTAGAGAGAAATCGTATTTTTTATATAACG
ATATGGGATGAAGATTATCCGCAATTATTACGTGAAATACAAGACCCTCCCTTCGTTTTATATGGAAAAGGAGAGAAAGA
TTTCCTGAATAAAGTAAATAAATTAGCAGTTGTTGGAACGAGAGAACCATCATTATATGGTCATGAGAGTTTGAAGTTTA
TTTTACACCCTTTATTAGAAAGAGAGTGGCTTATTGTCAGTGGGTTTGCAAAAGGGATAGATACAATGTCTCATGAGATT
ACAGTAAGGCATCATCGCCCGACTATTGCGATATTAGGGCATGGATTGTCTTTTATGTATCCGAAAGAAAATAGACATTT
ATATGAAATGTGGAAGGAATATATATTGTTATTGACAGAGTATCCGCCGCACTATGCACCGAAAAAGTGGTATTTTCCAA
AAAGGAACCGGATTATTAGTGGTATAAGTAAAGGTGTTTTAGTTGTAGAAGCGAAATCGAGAAGTGGAACACTTATTACT
GCAGACCTTGCGTTAGAGCAAAATAGAGAGGTGTTTGCGCTTCCTGGACCTATATTTATAGAGGGGGCATCGGGAACGAA
TCATCTTATTCAGCAAGGAGCAAAACTAGTAAGAAATGCAGAAGATATCTTGGAAGAGATTTTAAATTAA

Upstream 100 bases:

>100_bases
AAAAACTATTAATCTGTTGAAAGACACCTTCTTACTTGAGGGTGTCTTTTTACACTTTTTTCTGTTTACATAATAAAAAT
TATGGGTAAGGAGAATCAAG

Downstream 100 bases:

>100_bases
CCTTATATTTTTATGTTTTTATTAAACAATTATTGACAAATGGTAGATTGGCACTGTATGGTATATTCATTCTTGATTGA
CAAAAACAAGAGAAATCAAT

Product: DNA processing Smf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKRERLLHLHYLLADYWKAMERLLYVDPELKNIYKFNEKQMEHYTGISSKKSSELVKFLQSSNLPQYISYLERNRIFYIT
IWDEDYPQLLREIQDPPFVLYGKGEKDFLNKVNKLAVVGTREPSLYGHESLKFILHPLLEREWLIVSGFAKGIDTMSHEI
TVRHHRPTIAILGHGLSFMYPKENRHLYEMWKEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFIEGASGTNHLIQQGAKLVRNAEDILEEILN

Sequences:

>Translated_289_residues
MKRERLLHLHYLLADYWKAMERLLYVDPELKNIYKFNEKQMEHYTGISSKKSSELVKFLQSSNLPQYISYLERNRIFYIT
IWDEDYPQLLREIQDPPFVLYGKGEKDFLNKVNKLAVVGTREPSLYGHESLKFILHPLLEREWLIVSGFAKGIDTMSHEI
TVRHHRPTIAILGHGLSFMYPKENRHLYEMWKEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFIEGASGTNHLIQQGAKLVRNAEDILEEILN
>Mature_289_residues
MKRERLLHLHYLLADYWKAMERLLYVDPELKNIYKFNEKQMEHYTGISSKKSSELVKFLQSSNLPQYISYLERNRIFYIT
IWDEDYPQLLREIQDPPFVLYGKGEKDFLNKVNKLAVVGTREPSLYGHESLKFILHPLLEREWLIVSGFAKGIDTMSHEI
TVRHHRPTIAILGHGLSFMYPKENRHLYEMWKEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFIEGASGTNHLIQQGAKLVRNAEDILEEILN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=244, Percent_Identity=40.5737704918033, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 33858; Mature: 33858

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRERLLHLHYLLADYWKAMERLLYVDPELKNIYKFNEKQMEHYTGISSKKSSELVKFLQ
CCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
SSNLPQYISYLERNRIFYITIWDEDYPQLLREIQDPPFVLYGKGEKDFLNKVNKLAVVGT
HCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHEEEEEC
REPSLYGHESLKFILHPLLEREWLIVSGFAKGIDTMSHEITVRHHRPTIAILGHGLSFMY
CCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCEEEEEECCCEEEEEECCCEEEC
PKENRHLYEMWKEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
CCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEE
ADLALEQNREVFALPGPIFIEGASGTNHLIQQGAKLVRNAEDILEEILN
EEEEECCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MKRERLLHLHYLLADYWKAMERLLYVDPELKNIYKFNEKQMEHYTGISSKKSSELVKFLQ
CCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
SSNLPQYISYLERNRIFYITIWDEDYPQLLREIQDPPFVLYGKGEKDFLNKVNKLAVVGT
HCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHEEEEEC
REPSLYGHESLKFILHPLLEREWLIVSGFAKGIDTMSHEITVRHHRPTIAILGHGLSFMY
CCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCEEEEEECCCEEEEEECCCEEEC
PKENRHLYEMWKEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
CCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEE
ADLALEQNREVFALPGPIFIEGASGTNHLIQQGAKLVRNAEDILEEILN
EEEEECCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]