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The map label for this gene is 218232893

Identifier: 218232893

GI number: 218232893

Start: 2733276

End: 2734313

Strand: Reverse

Name: 218232893

Synonym: BCB4264_A2846

Alternate gene names: NA

Gene position: 2734313-2733276 (Counterclockwise)

Preceding gene: 218235277

Following gene: 218233634

Centisome position: 50.46

GC content: 37.28

Gene sequence:

>1038_bases
ATGAGGTCACAAAGAGTCTTTACGACGATTGATACACACACAGGTGGGAATCCAACGAGGACATTAATTAGTGGACTTCC
AAAGTTGATTGGAGAGACGATGGCAGAGAAGATGTTACATATGAAAAAGGAGTATGATTGGATTCGAAAATTGTTAATGA
ATGAACCGCGTGGTCATGATGTAATGTCAGGGGCATTATTAACAGACCCGTGTCATCCTGAGGCTGATATAGGTGTTATA
TACATAGAGACAGGTGGATATTTACCGATGTGTGGTCACGATACAATCGGTGTATGTACAGCGTTAGTTGAATCAGGTTT
AATTCCGGTAGTTGAACCGATTACTTCTTTAAAACTAGATACACCGGCTGGCTTAGTTGAAGTAGATATTGCTGTTCAAG
ATGGAAAAGCAAAAGAAGTATCTTTCTGTAACATACCAGCTTTTTTATTGAAAAATATTACTGTACAAGTGAAAGACATT
GGGACTATAGAGGCTGATATTGCGTATGGAGGGAATTTTTATGCCATTATTGATGCGAAATCAGTAGATCTAGAATTAGT
ACCAGAAAATGCATCTACAATCATCGATAAGGCGATTCATATAAGAAACACAATTAATGAGAAGTTTGAAATCACTCATC
CAGAGTATTCGTTTATAAGAGGATTAACACATGTTGAATTTTATACAGATCCTACTCATGAATGTGCGCATGTGAAAAAT
ACAGTTGTTGTACCACCAGGCGGAATAGATCGATCTCCATGCGGTACAGGAACATCTGCGAAGCTAGCTGTATTATACGC
TCAGAAAGAAATCGAAATTGGTGAAGAGTTCATTCATGAGAGTATCGTTGGTTCTTTATTTAAAGGATATGTCATGAATA
CGACACATGTTGAAAATATTGAAGCTGTCATAACGAAAATTACGGGATCAGCTTGGCTTATGGGTATGCATAGATTTTTT
TACAATGAAATGGATCCACTTAAAGAAGGATTTTTGCTAATTCCGCCGATGGAACATGAAACGGAGGATATAAAATGA

Upstream 100 bases:

>100_bases
TTACTGGAAAAATAATTGAAGAGTTATTAAATGAAAAAGAGACAATTATTCCTATTGAACCACTTCGTTTGAGTCGTTTT
ACAGAAAGGGTGTTAAACAG

Downstream 100 bases:

>100_bases
ACATTCAAAAAATGTATACAGCAGTAGACGTACATGTAAATGGCGAGGCATTTCGTGTAATGAAAGACGTACCATGCAAA
TACTACTACAGTTTGGAGCA

Product: putative proline racemase

Products: D-proline

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRSQRVFTTIDTHTGGNPTRTLISGLPKLIGETMAEKMLHMKKEYDWIRKLLMNEPRGHDVMSGALLTDPCHPEADIGVI
YIETGGYLPMCGHDTIGVCTALVESGLIPVVEPITSLKLDTPAGLVEVDIAVQDGKAKEVSFCNIPAFLLKNITVQVKDI
GTIEADIAYGGNFYAIIDAKSVDLELVPENASTIIDKAIHIRNTINEKFEITHPEYSFIRGLTHVEFYTDPTHECAHVKN
TVVVPPGGIDRSPCGTGTSAKLAVLYAQKEIEIGEEFIHESIVGSLFKGYVMNTTHVENIEAVITKITGSAWLMGMHRFF
YNEMDPLKEGFLLIPPMEHETEDIK

Sequences:

>Translated_345_residues
MRSQRVFTTIDTHTGGNPTRTLISGLPKLIGETMAEKMLHMKKEYDWIRKLLMNEPRGHDVMSGALLTDPCHPEADIGVI
YIETGGYLPMCGHDTIGVCTALVESGLIPVVEPITSLKLDTPAGLVEVDIAVQDGKAKEVSFCNIPAFLLKNITVQVKDI
GTIEADIAYGGNFYAIIDAKSVDLELVPENASTIIDKAIHIRNTINEKFEITHPEYSFIRGLTHVEFYTDPTHECAHVKN
TVVVPPGGIDRSPCGTGTSAKLAVLYAQKEIEIGEEFIHESIVGSLFKGYVMNTTHVENIEAVITKITGSAWLMGMHRFF
YNEMDPLKEGFLLIPPMEHETEDIK
>Mature_345_residues
MRSQRVFTTIDTHTGGNPTRTLISGLPKLIGETMAEKMLHMKKEYDWIRKLLMNEPRGHDVMSGALLTDPCHPEADIGVI
YIETGGYLPMCGHDTIGVCTALVESGLIPVVEPITSLKLDTPAGLVEVDIAVQDGKAKEVSFCNIPAFLLKNITVQVKDI
GTIEADIAYGGNFYAIIDAKSVDLELVPENASTIIDKAIHIRNTINEKFEITHPEYSFIRGLTHVEFYTDPTHECAHVKN
TVVVPPGGIDRSPCGTGTSAKLAVLYAQKEIEIGEEFIHESIVGSLFKGYVMNTTHVENIEAVITKITGSAWLMGMHRFF
YNEMDPLKEGFLLIPPMEHETEDIK

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=341, Percent_Identity=31.9648093841642, Blast_Score=192, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: 5.1.1.4

Molecular weight: Translated: 38094; Mature: 38094

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSQRVFTTIDTHTGGNPTRTLISGLPKLIGETMAEKMLHMKKEYDWIRKLLMNEPRGHD
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VMSGALLTDPCHPEADIGVIYIETGGYLPMCGHDTIGVCTALVESGLIPVVEPITSLKLD
HHCCCEECCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHEECC
TPAGLVEVDIAVQDGKAKEVSFCNIPAFLLKNITVQVKDIGTIEADIAYGGNFYAIIDAK
CCCCEEEEEEEEECCCCCCEEEECCHHHHHCCCEEEEEECCEEEEEEEECCCEEEEEECC
SVDLELVPENASTIIDKAIHIRNTINEKFEITHPEYSFIRGLTHVEFYTDPTHECAHVKN
CCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCEEEEEECCCCHHHHHCCC
TVVVPPGGIDRSPCGTGTSAKLAVLYAQKEIEIGEEFIHESIVGSLFKGYVMNTTHVENI
EEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH
EAVITKITGSAWLMGMHRFFYNEMDPLKEGFLLIPPMEHETEDIK
HHHHHHHCCHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MRSQRVFTTIDTHTGGNPTRTLISGLPKLIGETMAEKMLHMKKEYDWIRKLLMNEPRGHD
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VMSGALLTDPCHPEADIGVIYIETGGYLPMCGHDTIGVCTALVESGLIPVVEPITSLKLD
HHCCCEECCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHEECC
TPAGLVEVDIAVQDGKAKEVSFCNIPAFLLKNITVQVKDIGTIEADIAYGGNFYAIIDAK
CCCCEEEEEEEEECCCCCCEEEECCHHHHHCCCEEEEEECCEEEEEEEECCCEEEEEECC
SVDLELVPENASTIIDKAIHIRNTINEKFEITHPEYSFIRGLTHVEFYTDPTHECAHVKN
CCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCEEEEEECCCCHHHHHCCC
TVVVPPGGIDRSPCGTGTSAKLAVLYAQKEIEIGEEFIHESIVGSLFKGYVMNTTHVENI
EEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH
EAVITKITGSAWLMGMHRFFYNEMDPLKEGFLLIPPMEHETEDIK
HHHHHHHCCHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-proline

Specific reaction: L-proline = D-proline

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]