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The map label for this gene is yloC [H]

Identifier: 218232792

GI number: 218232792

Start: 3893646

End: 3894521

Strand: Reverse

Name: yloC [H]

Synonym: BCB4264_A3972

Alternate gene names: 218232792

Gene position: 3894521-3893646 (Counterclockwise)

Preceding gene: 218231831

Following gene: 218233398

Centisome position: 71.87

GC content: 34.36

Gene sequence:

>876_bases
ATGATTTCTAGTATGACAGGGTTTGGAAGATCGAAAGTAGAAAGTGATACTTTTCAAATTACAGTAGAAATGAAATCGGT
GAACCACCGTTTTTTAGAGATGAGTATTCGACTTCCTAAGCAAATGATGGTATTTGAGGACAAAATTCGTAAAATAATTG
CACAGCAAGTTCGACGTGGGCGCATCGAAGTGTCTATTAGTATAGCAGGTGAAGGACTTGTTGAAAGAAAATTAAGTGTG
AATTGGTCACTTCTTGAGCAGTACCAATCGATGATGGAAGATATAAAAGGGAAATTTCAATTACAAGATTCTATTACACT
TCAGCAATTAATGGCAATGCCAGAAGTAACAGCAATTGAAGAAATAGAAAATGTAAATGAACATTTTGAGAACAGTTTAT
ATGAGGCTGTTCGTCAAGCTGCTCATATGTTGAAAACGATGAGAGATGGCGAAGGAGAACGATTACATAAAGATATAGCG
TATCGTTTACAAGAGATTAGCAATTGTGTAAATGCGATTATTCCACATGCACCAATTGTTACACAAAAATATCGTGAACG
ATTAGAAAATCGCTTAAAAGAATTACATAATCAAGATCTAGATGAACAAAGATTGCTAACAGAAGTCGCAATCTTTGCAG
AGCGTTGTGATATTCATGAAGAGTTAGTTCGTTTGCAAAGTCATTTAGAGCAATTTCGTGAAACATTGCAGATTGAAGAG
CCTGTTGGAAGGAAAATGGATTTCATCGTGCAAGAGATGCATAGAGAAATTAATACGATTGGTTCTAAGGCAAATGACTT
AACAATTTCAAAATATGTTGTAGAAATGAAAAATAACCTTGAAAAAATTCGTGAACAAGTACAAAATATTGAGTAG

Upstream 100 bases:

>100_bases
GTCAATGTTATGAAAATGTGATATAATTTACAGAAGGTAGTAGAGCCTTGTCTCTATTACCTTTTTCATTGAGTTATTTT
ATGGCTTGGATGTGATAAAA

Downstream 100 bases:

>100_bases
CTTTCAAAAAATATATAAAGTTATACGTGGTGGAGAAATCGGATAGACTTACTAGGAGGCGCAAACTATGGCCATGCGGT
TTTTAAATATTGGATACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MISSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRGRIEVSISIAGEGLVERKLSV
NWSLLEQYQSMMEDIKGKFQLQDSITLQQLMAMPEVTAIEEIENVNEHFENSLYEAVRQAAHMLKTMRDGEGERLHKDIA
YRLQEISNCVNAIIPHAPIVTQKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE

Sequences:

>Translated_291_residues
MISSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRGRIEVSISIAGEGLVERKLSV
NWSLLEQYQSMMEDIKGKFQLQDSITLQQLMAMPEVTAIEEIENVNEHFENSLYEAVRQAAHMLKTMRDGEGERLHKDIA
YRLQEISNCVNAIIPHAPIVTQKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
>Mature_291_residues
MISSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRGRIEVSISIAGEGLVERKLSV
NWSLLEQYQSMMEDIKGKFQLQDSITLQQLMAMPEVTAIEEIENVNEHFENSLYEAVRQAAHMLKTMRDGEGERLHKDIA
YRLQEISNCVNAIIPHAPIVTQKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=297, Percent_Identity=31.3131313131313, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34140; Mature: 34140

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRG
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
RIEVSISIAGEGLVERKLSVNWSLLEQYQSMMEDIKGKFQLQDSITLQQLMAMPEVTAIE
CEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
EIENVNEHFENSLYEAVRQAAHMLKTMRDGEGERLHKDIAYRLQEISNCVNAIIPHAPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TQKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRG
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
RIEVSISIAGEGLVERKLSVNWSLLEQYQSMMEDIKGKFQLQDSITLQQLMAMPEVTAIE
CEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
EIENVNEHFENSLYEAVRQAAHMLKTMRDGEGERLHKDIAYRLQEISNCVNAIIPHAPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TQKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]