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The map label for this gene is scpA [H]

Identifier: 218232407

GI number: 218232407

Start: 4072896

End: 4073639

Strand: Reverse

Name: scpA [H]

Synonym: BCB4264_A4167

Alternate gene names: 218232407

Gene position: 4073639-4072896 (Counterclockwise)

Preceding gene: 218230889

Following gene: 218233038

Centisome position: 75.17

GC content: 31.85

Gene sequence:

>744_bases
GTGCAATATAATTTTAAAGTAGAGGCTTTTGAAGGGCCGTTAGATCTATTGTTACATTTAATACATCGTTATGAAATTGA
TATATATAATATTCCTGTAGCAGATATTACAGAGCAATATTTATCTTATGTGCATACGATGAAAGAACTTCAATTAGATG
TTGCAAGTGAGTATTTAGTAATGGCTGCAACGTTATTACAAATTAAAAGTAAGATGTTGTTGCCGAAACATGAAGAAGAT
GTACTTGATAACGGTGATGATTTTATAGATGATCCTCGTCAAGAATTGATGGAGAGGTTAATTGAATATAAGAAATATAA
GCAAGTTGCTACTGAGTTAAAAGAAAGAGAACAAGAAAGAGCACAGCTATATACACGTCCACCAATTGACTTTACATCGT
TGCAACAAGAAGAGGAGACAAGCTTACCTCTTGATGTTACGTTATATGATATGCTAGCAGCATTTCAAAAATTAATGCGC
CGTAAAAAGGCAAAAAAACCTGTAACAACACGTATTACTCGTCAAGAAATACCAATTGAACAGCGAATGACTGATATTTT
AAAACAGTTAAAAATAAAGGGTGGTCGCCAAAGTTTTTATGATTTGTTTGTTGATGATGAACGTGAAATAATGGTTGTAA
CATTTTTAGCAGTTCTGGAACTTATGAAAAATCAACAAATCATAATTGAGCAAGAACATAATTTTGATGAAATTTTCGTA
TCAAGCTCTAATAAATCTGCATAG

Upstream 100 bases:

>100_bases
GCATCGGTCTATTTTTAATTAAATTTCTTAAAAAGGTTGGATAGAACATGAGTATGCTCTATACTTATGTTGTTATAGAA
AAAATGTGGTGGGATGCTTT

Downstream 100 bases:

>100_bases
AGCAAGTATGTGAAAATGGGATAGCAACATTTTATCTCATGCTATGTTTTAATGTATCGTTTGGAACAAGAGAAAAAATA
TTGAACCGAACGCATTAATT

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVADITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEED
VLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETSLPLDVTLYDMLAAFQKLMR
RKKAKKPVTTRITRQEIPIEQRMTDILKQLKIKGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
SSSNKSA

Sequences:

>Translated_247_residues
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVADITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEED
VLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETSLPLDVTLYDMLAAFQKLMR
RKKAKKPVTTRITRQEIPIEQRMTDILKQLKIKGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
SSSNKSA
>Mature_247_residues
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVADITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEED
VLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETSLPLDVTLYDMLAAFQKLMR
RKKAKKPVTTRITRQEIPIEQRMTDILKQLKIKGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
SSSNKSA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29241; Mature: 29241

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVADITEQYLSYVHTMKELQLDVASEYLV
CCCCEEEEECCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLQIKSKMLLPKHEEDVLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQER
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYTRPPIDFTSLQQEEETSLPLDVTLYDMLAAFQKLMRRKKAKKPVTTRITRQEIPIE
HHHCCCCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
QRMTDILKQLKIKGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE
SSSNKSA
ECCCCCC
>Mature Secondary Structure
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVADITEQYLSYVHTMKELQLDVASEYLV
CCCCEEEEECCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLQIKSKMLLPKHEEDVLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQER
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYTRPPIDFTSLQQEEETSLPLDVTLYDMLAAFQKLMRRKKAKKPVTTRITRQEIPIE
HHHCCCCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
QRMTDILKQLKIKGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE
SSSNKSA
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA