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The map label for this gene is dcyD [H]

Identifier: 218232382

GI number: 218232382

Start: 3126541

End: 3127536

Strand: Reverse

Name: dcyD [H]

Synonym: BCB4264_A3235

Alternate gene names: 218232382

Gene position: 3127536-3126541 (Counterclockwise)

Preceding gene: 218234184

Following gene: 218231718

Centisome position: 57.71

GC content: 38.35

Gene sequence:

>996_bases
ATGAATTTAGCTAAATTCCCGAGAAAAAAATATACAGAATCATATACACCAATTGAAAAGTTAAACAATTTTTCTGAAGC
ACTTGGTGGCCCGACTATTTATTTTAAACGAGATGATTTACTTGGTTTAACAGCCGGTGGCAATAAGACGAGAAAGTTAG
AATTTCTAGTTGCAGATGCACAGGAAAAGGGTGCAGATACATTAATTACAGCTGGTGGTATTCAGTCAAATCATTGCCGC
CTGACACTTGCTGCTGCGGTAAAAGAAAAAATGAAATGTATTCTTGTATTAGAGGAAGGGCTTGAGCCAGAAGAGAAGAG
AGACTTTAACGGAAACTATTTCTTATATCACTTATTAGGTGCTGAAAACGTCATTGTTGTACCGAACGGAGCAGACCTGA
TGGAAGAAATGCATAAAGTAGCAAAAGAAGTAAGTGAAAAAGGGAATACACCATATGTAATTCCAGTTGGTGGATCAAAC
CCTACAGGCGCAATGGGATACGTTGCTTGTGCCCAAGAAATTATGGCGCAATCATTTGAGCAAGGAATTGATTTCAGTTC
AGTTGTTTGTGTAAGTGGTAGCGGCGGTATGCATGCTGGTTTAATTACTGGTTTTTCTGGAACGCAAAGTCATATTCCTG
TAATTGGAATTAATGTAAGTAGAGGAAAAGCTGAGCAAGAAGAGAAAGTAGCAAAACTTGTAGATGAAACTTCAGTACAT
GTTGGTATTCCAAACTTTATCTCGCGCGACGCTGTTACGTGCTTTGATGAATATGTAGGACCAGGCTATGCGTTACCAAC
GCCGGAAATGGTAGAGGCAGTTCAGTTACTTGCGAAAACAGAAGGTATTTTACTTGATCCAGTGTATACAGGTAAGGCAG
TAGCGGGATTAATCGACTTAATTAGAAAAGGTAAATTTAATAAGGAAGACAATATTTTATTCGTACATTCAGGTGGTTCA
CCAGCTTTATATGCGAATACTTCTTTATTTGCGTAA

Upstream 100 bases:

>100_bases
TCTAATACATTTTTAACCGAGAAAGATGACTTCACCATTTTTACGTGTAATAATAGTAACGTTACATATATTGTGAAAGA
AGTACAAAAGGAGCGTTACA

Downstream 100 bases:

>100_bases
GTGTAAAAAGCATTGGGTATCCAATGCTTTTTTTGTTATATACTCGAATTATCGGGGAGTAGGAGGATGATATGAACTCA
AATTTAAAAGGGATTATATA

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNLAKFPRKKYTESYTPIEKLNNFSEALGGPTIYFKRDDLLGLTAGGNKTRKLEFLVADAQEKGADTLITAGGIQSNHCR
LTLAAAVKEKMKCILVLEEGLEPEEKRDFNGNYFLYHLLGAENVIVVPNGADLMEEMHKVAKEVSEKGNTPYVIPVGGSN
PTGAMGYVACAQEIMAQSFEQGIDFSSVVCVSGSGGMHAGLITGFSGTQSHIPVIGINVSRGKAEQEEKVAKLVDETSVH
VGIPNFISRDAVTCFDEYVGPGYALPTPEMVEAVQLLAKTEGILLDPVYTGKAVAGLIDLIRKGKFNKEDNILFVHSGGS
PALYANTSLFA

Sequences:

>Translated_331_residues
MNLAKFPRKKYTESYTPIEKLNNFSEALGGPTIYFKRDDLLGLTAGGNKTRKLEFLVADAQEKGADTLITAGGIQSNHCR
LTLAAAVKEKMKCILVLEEGLEPEEKRDFNGNYFLYHLLGAENVIVVPNGADLMEEMHKVAKEVSEKGNTPYVIPVGGSN
PTGAMGYVACAQEIMAQSFEQGIDFSSVVCVSGSGGMHAGLITGFSGTQSHIPVIGINVSRGKAEQEEKVAKLVDETSVH
VGIPNFISRDAVTCFDEYVGPGYALPTPEMVEAVQLLAKTEGILLDPVYTGKAVAGLIDLIRKGKFNKEDNILFVHSGGS
PALYANTSLFA
>Mature_331_residues
MNLAKFPRKKYTESYTPIEKLNNFSEALGGPTIYFKRDDLLGLTAGGNKTRKLEFLVADAQEKGADTLITAGGIQSNHCR
LTLAAAVKEKMKCILVLEEGLEPEEKRDFNGNYFLYHLLGAENVIVVPNGADLMEEMHKVAKEVSEKGNTPYVIPVGGSN
PTGAMGYVACAQEIMAQSFEQGIDFSSVVCVSGSGGMHAGLITGFSGTQSHIPVIGINVSRGKAEQEEKVAKLVDETSVH
VGIPNFISRDAVTCFDEYVGPGYALPTPEMVEAVQLLAKTEGILLDPVYTGKAVAGLIDLIRKGKFNKEDNILFVHSGGS
PALYANTSLFA

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=329, Percent_Identity=46.2006079027356, Blast_Score=264, Evalue=6e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35553; Mature: 35553

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAKFPRKKYTESYTPIEKLNNFSEALGGPTIYFKRDDLLGLTAGGNKTRKLEFLVADA
CCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCEEEEEEEECC
QEKGADTLITAGGIQSNHCRLTLAAAVKEKMKCILVLEEGLEPEEKRDFNGNYFLYHLLG
HHCCCCEEEEECCCCCCCEEEEHHHHHHHHCEEEEEEECCCCCHHHCCCCCCEEEEEEEC
AENVIVVPNGADLMEEMHKVAKEVSEKGNTPYVIPVGGSNPTGAMGYVACAQEIMAQSFE
CCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
QGIDFSSVVCVSGSGGMHAGLITGFSGTQSHIPVIGINVSRGKAEQEEKVAKLVDETSVH
HCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEE
VGIPNFISRDAVTCFDEYVGPGYALPTPEMVEAVQLLAKTEGILLDPVYTGKAVAGLIDL
ECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH
IRKGKFNKEDNILFVHSGGSPALYANTSLFA
HHCCCCCCCCCEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure
MNLAKFPRKKYTESYTPIEKLNNFSEALGGPTIYFKRDDLLGLTAGGNKTRKLEFLVADA
CCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCEEEEEEEECC
QEKGADTLITAGGIQSNHCRLTLAAAVKEKMKCILVLEEGLEPEEKRDFNGNYFLYHLLG
HHCCCCEEEEECCCCCCCEEEEHHHHHHHHCEEEEEEECCCCCHHHCCCCCCEEEEEEEC
AENVIVVPNGADLMEEMHKVAKEVSEKGNTPYVIPVGGSNPTGAMGYVACAQEIMAQSFE
CCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
QGIDFSSVVCVSGSGGMHAGLITGFSGTQSHIPVIGINVSRGKAEQEEKVAKLVDETSVH
HCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEE
VGIPNFISRDAVTCFDEYVGPGYALPTPEMVEAVQLLAKTEGILLDPVYTGKAVAGLIDL
ECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH
IRKGKFNKEDNILFVHSGGSPALYANTSLFA
HHCCCCCCCCCEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA