Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 218232281

GI number: 218232281

Start: 330367

End: 331137

Strand: Direct

Name: yfcA [C]

Synonym: BCB4264_A0354

Alternate gene names: 218232281

Gene position: 330367-331137 (Clockwise)

Preceding gene: 218233218

Following gene: 218234719

Centisome position: 6.1

GC content: 31.91

Gene sequence:

>771_bases
ATGGAAGAATTAAGTTTTCAAGTCATTATTTTATTAATTGCATTCGGTTTTTTAGCAGCTTTTATTGATTCCGTTGTTGG
AGGAGGAGGGTTAATTTCGCTTCCTGCACTTATGTTTGTTGGCTTATCGCCAGCTTCGGCAATTGCAACGAATAAATTAG
CGGCAACAATGGGGACGTTTACGAGTGCGATGTATTTCATTCGATCAGGAAAAGTTGATTTTAAAATTGTAGGAAAGTTA
ATCCCGTTAACTATTGTTGGAGCTGTTGCAGGTGCTTTAGTAGTAAAATTTATTCCACCGGATATTTTACGCCCATTAGT
ACTTGTAATGTTGGTATTTATTGCTATTTATATTATTGCAAAAAAGAATTGGGGAAGTGTGTCTACCTATAAGAAGATGA
CGCAAAGAAAAACATTAATATTTTTCTTTGCTATTTTAATGATAGGATTTTATGATGGATTTTTTGGACCAGGGACAGGG
TCGTTTTTAATTTTTGCATTTTTATTAATTGGCCTGGATTTTATTCAAGCGGCAGCATCTGGAAAACTTTTGAACTTTGT
TAGTAATATTGTATCTTTAATTACTTTTTTATTTTTAGATATAATTCATTTTGAATACGGTATTATCATGGGATTATCAA
TGATCTTAGGTGCTTATTTTGGATCGAAGTTTGCGGTTCAAAAAGGTGTTGGATATGTAAGGACTTTATTTTTATTAGTT
ACTATATTATTGATCGGGAAAAATGTTTTGGAATATACTCATATTTTGTAG

Upstream 100 bases:

>100_bases
TTAAATATGAAGGCTGTTCCTCTATGGAACAGCTTTTTTTCTTATGTAATTTTGTTATAATTTAAAATGTTGTAAAAAAT
AGGGGTAAGGGGTAAAGCTC

Downstream 100 bases:

>100_bases
ATTCATACGCATGTATGAATCTCTTTTTTTTATTATATTTTAAAAATTTATTAATTTTTAAAATATAAGTCTAGGAATAT
TTGAATAAATCTAAATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MEELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLSPASAIATNKLAATMGTFTSAMYFIRSGKVDFKIVGKL
IPLTIVGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDIIHFEYGIIMGLSMILGAYFGSKFAVQKGVGYVRTLFLLV
TILLIGKNVLEYTHIL

Sequences:

>Translated_256_residues
MEELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLSPASAIATNKLAATMGTFTSAMYFIRSGKVDFKIVGKL
IPLTIVGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDIIHFEYGIIMGLSMILGAYFGSKFAVQKGVGYVRTLFLLV
TILLIGKNVLEYTHIL
>Mature_256_residues
MEELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLSPASAIATNKLAATMGTFTSAMYFIRSGKVDFKIVGKL
IPLTIVGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDIIHFEYGIIMGLSMILGAYFGSKFAVQKGVGYVRTLFLLV
TILLIGKNVLEYTHIL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=234, Percent_Identity=38.034188034188, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27772; Mature: 27772

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]