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The map label for this gene is fliF [H]

Identifier: 218232102

GI number: 218232102

Start: 1628983

End: 1630557

Strand: Direct

Name: fliF [H]

Synonym: BCB4264_A1712

Alternate gene names: 218232102

Gene position: 1628983-1630557 (Clockwise)

Preceding gene: 218231410

Following gene: 218234047

Centisome position: 30.06

GC content: 37.65

Gene sequence:

>1575_bases
ATGGAAAAGATGAAAAATGTTATCCAATCGTTAAAAACGTGGCATAAGTTAGTAATTGGTGCTGCGCTTTTAGCGATTGT
AACAGGAGCACTTTTATACTTCACCTTGCCAGATAAATATGTTGTTGTATATCAAAATTTAAATGATACAGATAAACAAG
AGATTACAGCAGAATTATCGAAGTTAGGTGTCGATTATCAATTAGCGGCCGATGGTTCGATTCGTGTGCAAAAGAATGAT
GCTCCATGGGTTCGAAAAGAAATGAATGGGATGGGCTTACCGTTTAATTCGAAAAGCGGTGAGGAAATTTTATTAGAAAG
CTCGCTCGGTTCAAGTGAGCAAGATAAAAAAATGAAGCAAATTGTCGGTACGAAGAAGCAATTGGAGCAAGATATTGTAA
GAAATTTTGCGACAGTTGAAACGGCAAATGTTCAAATTACATTGCCTGAAAAAGAGACAATTTTTGATGAAGAAAAAGCA
AAAGGAACAGCGGCGATTACGGTTGGAGTGAAGCGTGGACAATTGTTAACAGCTGATCAAGTTGCGGGTATACAGCAAAT
GATTAGTGCAGCGGTTCCTGGTGTGAAAGCAGAAGAAGTAAGTGTTATTGATAGTAAAAAAGGTGTTATCTCAAAAGGAG
CAGATGAAGCACATTCTAGTAGTTCCTCCTCTTATGAGAAAGAAGTAGAGATGCAGCACCAACTTGAAGGTAAATTAAAG
CAAGACATTGATGCAACGTTAATGACGATGTTTAAACCGAATGAATATAAAGTGAATACGAAAGTATCTGTAAACTACGA
TGAAGTTACACGTCAGTCAGAGAAGTATGGTGATAAAGGTGTACTTCGTAGTAAACAAGAGCAGGAGGAAAGCTCTACTG
CGCAAGAAGGGGCAGATACGAAGCAAGGTGCTGGTATTACAGCGAACGGTGAAGTGCCAAACTACGGTACGAACAATAAT
CAAAATGGTAAAGTTGTCTACGATAATAAAAATGGCAACAAAATCGAAAACTATGAAATAGATAAAACAGTTGAAACAAT
TAAGAAACACCCAGAATTAACGAAAACAAATGTTGTTGTATGGGTAGATAATGATACGTTAGTAAAACGAAGAATTGATA
TGACTACTTTCAAAGAAGCAATCGGAACAGCGGCAGGACTTCAAGCTGATCCGAACGGTAACTTTATAAATGGTCAAGTT
AACGTTGTAACTGTTCAGTTCGATCAGCCGAAAGCCGAAAAAGAGAAAGAGCCAGAAAAAAGTGGTATAAACTGGTGGTT
ATTCGGTGGAATTACAGCTGGCTTATTAGCAATCGGTGGTCTAGTATGGTTCTTATTAGCAAGACGTAAGAGAAAGAAAG
AAGAAGAGGAATATGAAGAATACTTAGCAGAAGAGGAAATTGCTGCAAGTAATGAAAGTATCTTGGAAATTCCTGAAGAA
AAAATAGTGCCAGAGCCAAAACCTGAACCAGAAGAACCGAAAGAACCAACGTTAGATGAACAAGTGCAGGATGCTACGAA
AGAACATGTAGAAGGTACTGCAAAAGTAATTAAAAAATGGTTAAACGGACAGTAA

Upstream 100 bases:

>100_bases
TCTCAAATGAAAACAGCTGCTCTCGTACGTGATAATCTTATTGAAAATTATAAGTCACTAATTAATATGCAAATTTAGGA
AAGTGGACGGGTGTGTTTAA

Downstream 100 bases:

>100_bases
GGGAGGAACAATGATGTTAGATGAAATCTCCTCCAAAGAAAAAGCTGCCATCCTTATTCGTACATTAGAAGAAGGGGTGG
CAGCAAAAGTCATTGAATAT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDTDKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSSSSSSYEKEVEMQHQLEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGADTKQGAGITANGEVPNYGTNNN
QNGKVVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFINGQV
NVVTVQFDQPKAEKEKEPEKSGINWWLFGGITAGLLAIGGLVWFLLARRKRKKEEEEYEEYLAEEEIAASNESILEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ

Sequences:

>Translated_524_residues
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDTDKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSSSSSSYEKEVEMQHQLEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGADTKQGAGITANGEVPNYGTNNN
QNGKVVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFINGQV
NVVTVQFDQPKAEKEKEPEKSGINWWLFGGITAGLLAIGGLVWFLLARRKRKKEEEEYEEYLAEEEIAASNESILEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
>Mature_524_residues
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDTDKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSSSSSSYEKEVEMQHQLEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGADTKQGAGITANGEVPNYGTNNN
QNGKVVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFINGQV
NVVTVQFDQPKAEKEKEPEKSGINWWLFGGITAGLLAIGGLVWFLLARRKRKKEEEEYEEYLAEEEIAASNESILEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=373, Percent_Identity=23.5924932975871, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58134; Mature: 58134

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDTDKQEITAELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHH
KLGVDYQLAADGSIRVQKNDAPWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQ
HCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
IVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKAKGTAAITVGVKRGQLLTADQ
HHCCHHHHHHHHHHHHHHEEECEEEEEECCCHHHCCHHHCCCCEEEEEEECCCCEECHHH
VAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSSSSSSYEKEVEMQHQLEGKLK
HHHHHHHHHHHCCCCCCCCEEEECCCCCCHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGADT
HHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCC
KQGAGITANGEVPNYGTNNNQNGKVVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVV
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEE
WVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFINGQVNVVTVQFDQPKAEKEKEPEK
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEEEEECCCCCHHHCCHHH
SGINWWLFGGITAGLLAIGGLVWFLLARRKRKKEEEEYEEYLAEEEIAASNESILEIPEE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCHH
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDTDKQEITAELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHH
KLGVDYQLAADGSIRVQKNDAPWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQ
HCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
IVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKAKGTAAITVGVKRGQLLTADQ
HHCCHHHHHHHHHHHHHHEEECEEEEEECCCHHHCCHHHCCCCEEEEEEECCCCEECHHH
VAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSSSSSSYEKEVEMQHQLEGKLK
HHHHHHHHHHHCCCCCCCCEEEECCCCCCHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGADT
HHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCC
KQGAGITANGEVPNYGTNNNQNGKVVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVV
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEE
WVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFINGQVNVVTVQFDQPKAEKEKEPEK
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEEEEECCCCCHHHCCHHH
SGINWWLFGGITAGLLAIGGLVWFLLARRKRKKEEEEYEEYLAEEEIAASNESILEIPEE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCHH
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]